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ublcp1 ubiquitin-like domain containing CTD phosphatase 1 [ Poecilia reticulata (guppy) ]

Gene ID: 103475695, updated on 11-Mar-2024

Summary

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Gene symbol
ublcp1
Gene description
ubiquitin-like domain containing CTD phosphatase 1
Gene type
protein coding
RefSeq status
MODEL
Organism
Poecilia reticulata
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Atherinomorphae; Cyprinodontiformes; Poeciliidae; Poeciliinae; Poecilia
Annotation information
Annotation category: partial on reference assembly
Orthologs
human zebrafish all
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Genomic context

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Location:
chromosome: LG14
Exon count:
11
Annotation release Status Assembly LG Location
101 current Guppy_female_1.0+MT (GCF_000633615.1) LG14 NC_024344.1 (3395599..3400476, complement)

Linkage Group LG14 - NC_024344.1Genomic Context describing neighboring genes Neighboring gene ubiquitin domain containing 2 Neighboring gene interleukin 12B, b Neighboring gene ring finger protein 145 Neighboring gene uncharacterized LOC103475668 Neighboring gene transcription factor COE1

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_024344.1 Chromosome LG14 Reference Guppy_female_1.0+MT Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein serine/threonine phosphatase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein dephosphorylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
ubiquitin-like domain-containing CTD phosphatase 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Poecilia reticulata Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Guppy_female_1.0+MT Primary Assembly

Genomic

  1. NC_024344.1 Reference Guppy_female_1.0+MT Primary Assembly

    Range
    3395599..3400476 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_008427499.2 → XP_008425721.1  ubiquitin-like domain-containing CTD phosphatase 1

    UniProtKB/TrEMBL
    A0A3P9NP54
    Conserved Domains (3) summary
    TIGR02245
    Location:117 → 311
    HAD_IIID1; HAD-superfamily subfamily IIID hydrolase, TIGR02245
    cd01813
    Location:3 → 77
    UBP_N; UBP ubiquitin processing protease
    smart00213
    Location:3 → 77
    UBQ; Ubiquitin homologues
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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