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lman1 lectin, mannose-binding, 1 [ Poecilia reticulata (guppy) ]

Gene ID: 103473884, updated on 11-Mar-2024

Summary

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Gene symbol
lman1
Gene description
lectin, mannose-binding, 1
See related
Ensembl:ENSPREG00000018048
Gene type
protein coding
RefSeq status
MODEL
Organism
Poecilia reticulata
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Atherinomorphae; Cyprinodontiformes; Poeciliidae; Poeciliinae; Poecilia
Orthologs
human zebrafish all
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Genomic context

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Location:
chromosome: LG12
Exon count:
13
Annotation release Status Assembly LG Location
101 current Guppy_female_1.0+MT (GCF_000633615.1) LG12 NC_024342.1 (20283550..20293843, complement)

Linkage Group LG12 - NC_024342.1Genomic Context describing neighboring genes Neighboring gene retinal homeobox gene 3 Neighboring gene complexin 4a Neighboring gene collagen and calcium binding EGF domains 1 Neighboring gene potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_024342.1 Chromosome LG12 Reference Guppy_female_1.0+MT Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables mannose binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in Golgi organization IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in endoplasmic reticulum organization IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in endoplasmic reticulum to Golgi vesicle-mediated transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in COPII-coated ER to Golgi transport vesicle IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in Golgi membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in endoplasmic reticulum membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in endoplasmic reticulum-Golgi intermediate compartment IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
protein ERGIC-53

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Poecilia reticulata Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Guppy_female_1.0+MT Primary Assembly

Genomic

  1. NC_024342.1 Reference Guppy_female_1.0+MT Primary Assembly

    Range
    20283550..20293843 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_008424517.2 → XP_008422739.1  protein ERGIC-53

    UniProtKB/TrEMBL
    A0A3P9PXR4, A0A3P9PXT6
    Related
    ENSPREP00000026702.1, ENSPRET00000026981.1
    Conserved Domains (1) summary
    cd06902
    Location:39 → 263
    lectin_ERGIC-53_ERGL; ERGIC-53 and ERGL type 1 transmembrane proteins, N-terminal lectin domain
Nucleotide Protein
Heading Accession and Version

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