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rbm18 RNA binding motif protein 18 [ Poecilia reticulata (guppy) ]

Gene ID: 103473648, updated on 11-Mar-2024

Summary

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Gene symbol
rbm18
Gene description
RNA binding motif protein 18
See related
Ensembl:ENSPREG00000009157
Gene type
protein coding
RefSeq status
MODEL
Organism
Poecilia reticulata
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Atherinomorphae; Cyprinodontiformes; Poeciliidae; Poeciliinae; Poecilia
Orthologs
human zebrafish all
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Genomic context

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Location:
chromosome: LG12
Exon count:
6
Annotation release Status Assembly LG Location
101 current Guppy_female_1.0+MT (GCF_000633615.1) LG12 NC_024342.1 (14799081..14812812)

Linkage Group LG12 - NC_024342.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC103473646 Neighboring gene mitochondrial ribosome recycling factor Neighboring gene LIM homeobox 6a Neighboring gene MORN repeat containing 5

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_024342.1 Chromosome LG12 Reference Guppy_female_1.0+MT Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables RNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
probable RNA-binding protein 18

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Poecilia reticulata Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Guppy_female_1.0+MT Primary Assembly

Genomic

  1. NC_024342.1 Reference Guppy_female_1.0+MT Primary Assembly

    Range
    14799081..14812812
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_008424037.2 → XP_008422259.1  probable RNA-binding protein 18 isoform X1

    See identical proteins and their annotated locations for XP_008422259.1

    UniProtKB/TrEMBL
    A0A3P9NV72
    Conserved Domains (2) summary
    TIGR01661
    Location:17 → 185
    ELAV_HUD_SF; ELAV/HuD family splicing factor
    cd12355
    Location:24 → 103
    RRM_RBM18; RNA recognition motif (RRM) found in eukaryotic RNA-binding protein 18 and similar proteins

  2. XM_008424038.2 → XP_008422260.1  probable RNA-binding protein 18 isoform X2

    See identical proteins and their annotated locations for XP_008422260.1

    UniProtKB/TrEMBL
    A0A3P9NV72, A0A3P9NV97
    Related
    ENSPREP00000013491.1, ENSPRET00000013628.1
    Conserved Domains (2) summary
    TIGR01661
    Location:17 → 183
    ELAV_HUD_SF; ELAV/HuD family splicing factor
    cd12355
    Location:24 → 103
    RRM_RBM18; RNA recognition motif (RRM) found in eukaryotic RNA-binding protein 18 and similar proteins
Nucleotide Protein
Heading Accession and Version

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