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cul4b cullin 4B [ Poecilia reticulata (guppy) ]

Gene ID: 103471554, updated on 11-Mar-2024

Summary

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Gene symbol
cul4b
Gene description
cullin 4B
See related
Ensembl:ENSPREG00000011997
Gene type
protein coding
RefSeq status
MODEL
Organism
Poecilia reticulata
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Atherinomorphae; Cyprinodontiformes; Poeciliidae; Poeciliinae; Poecilia
Orthologs
human zebrafish all
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Genomic context

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Location:
chromosome: LG10
Exon count:
20
Annotation release Status Assembly LG Location
101 current Guppy_female_1.0+MT (GCF_000633615.1) LG10 NC_024340.1 (16638391..16656171)

Linkage Group LG10 - NC_024340.1Genomic Context describing neighboring genes Neighboring gene C1GALT1-specific chaperone 1 Neighboring gene MCTS1 re-initiation and release factor Neighboring gene uncharacterized LOC103471555 Neighboring gene lysosomal-associated membrane protein 2 Neighboring gene uncharacterized LOC103471552 Neighboring gene ATPase Na+/K+ transporting subunit beta 4

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_024340.1 Chromosome LG10 Reference Guppy_female_1.0+MT Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ubiquitin protein ligase binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in DNA damage response IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein ubiquitination IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in ubiquitin-dependent protein catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of Cul4B-RING E3 ubiquitin ligase complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
cullin-4B

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Poecilia reticulata Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Guppy_female_1.0+MT Primary Assembly

Genomic

  1. NC_024340.1 Reference Guppy_female_1.0+MT Primary Assembly

    Range
    16638391..16656171
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_008420634.2 → XP_008418856.1  cullin-4B

    UniProtKB/TrEMBL
    A0A3P9P7U4
    Related
    ENSPREP00000017778.1, ENSPRET00000017968.1
    Conserved Domains (3) summary
    smart00182
    Location:555 → 695
    CULLIN; Cullin
    smart00884
    Location:801 → 866
    Cullin_Nedd8; Cullin protein neddylation domain
    pfam00888
    Location:177 → 772
    Cullin; Cullin family
Nucleotide Protein
Heading Accession and Version

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