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vps37ba VPS37B subunit of ESCRT-I a [ Poecilia reticulata (guppy) ]

Gene ID: 103469548, updated on 11-Mar-2024

Summary

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Gene symbol
vps37ba
Gene description
VPS37B subunit of ESCRT-I a
See related
Ensembl:ENSPREG00000015058
Gene type
protein coding
RefSeq status
MODEL
Organism
Poecilia reticulata
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Atherinomorphae; Cyprinodontiformes; Poeciliidae; Poeciliinae; Poecilia
Also known as
vps37b
Orthologs
human zebrafish all
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Genomic context

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Location:
chromosome: LG9
Exon count:
5
Annotation release Status Assembly LG Location
101 current Guppy_female_1.0+MT (GCF_000633615.1) LG9 NC_024339.1 (2330715..2349199, complement)

Linkage Group LG9 - NC_024339.1Genomic Context describing neighboring genes Neighboring gene ADAM metallopeptidase domain 28 Neighboring gene protein phosphatase 3, catalytic subunit, gamma isozyme, a Neighboring gene ATP-binding cassette, sub-family B (MDR/TAP), member 9 Neighboring gene 2-oxoglutarate and iron-dependent oxygenase domain containing 2 Neighboring gene solute carrier family 4 member 5a

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_024339.1 Chromosome LG9 Reference Guppy_female_1.0+MT Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in protein targeting to membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein targeting to vacuole IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in ubiquitin-dependent protein catabolic process via the multivesicular body sorting pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of ESCRT I complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
vacuolar protein sorting-associated protein 37B
Names
VPS37B, ESCRT-I subunit
vacuolar protein sorting 37 homolog B

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Poecilia reticulata Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Guppy_female_1.0+MT Primary Assembly

Genomic

  1. NC_024339.1 Reference Guppy_female_1.0+MT Primary Assembly

    Range
    2330715..2349199 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_008417293.2 → XP_008415515.1  vacuolar protein sorting-associated protein 37B isoform X1

    UniProtKB/TrEMBL
    A0A3P9PK81
    Related
    ENSPREP00000022287.1, ENSPRET00000022519.1
    Conserved Domains (1) summary
    pfam07200
    Location:12 → 150
    Mod_r; Modifier of rudimentary (Mod(r)) protein

  2. XM_008417294.2 → XP_008415516.1  vacuolar protein sorting-associated protein 37B isoform X2

    Conserved Domains (1) summary
    pfam07200
    Location:2 → 116
    Mod_r; Modifier of rudimentary (Mod(r)) protein
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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