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tom1 target of myb1 membrane trafficking protein [ Poecilia reticulata (guppy) ]

Gene ID: 103468520, updated on 11-Mar-2024

Summary

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Gene symbol
tom1
Gene description
target of myb1 membrane trafficking protein
Gene type
protein coding
RefSeq status
MODEL
Organism
Poecilia reticulata
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Atherinomorphae; Cyprinodontiformes; Poeciliidae; Poeciliinae; Poecilia
Annotation information
Annotation category: partial on reference assembly
Orthologs
human zebrafish all
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Genomic context

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Location:
chromosome: LG8
Exon count:
12
Annotation release Status Assembly LG Location
101 current Guppy_female_1.0+MT (GCF_000633615.1) LG8 NC_024338.1 (6947465..6955346, complement)

Linkage Group LG8 - NC_024338.1Genomic Context describing neighboring genes Neighboring gene minichromosome maintenance complex component 5 Neighboring gene glycine C-acetyltransferase Neighboring gene uncharacterized LOC103468391 Neighboring gene major facilitator superfamily domain containing 6-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_024338.1 Chromosome LG8 Reference Guppy_female_1.0+MT Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables clathrin binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables phosphatidylinositol binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables ubiquitin binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in signal transduction IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in endosome IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
target of Myb protein 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Poecilia reticulata Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Guppy_female_1.0+MT Primary Assembly

Genomic

  1. NC_024338.1 Reference Guppy_female_1.0+MT Primary Assembly

    Range
    6947465..6955346 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_017306101.1 → XP_017161590.1  target of Myb protein 1

Nucleotide Protein
Heading Accession and Version

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