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evc2 EvC ciliary complex subunit 2 [ Poecilia reticulata (guppy) ]

Gene ID: 103464959, updated on 9-Nov-2023

Summary

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Gene symbol
evc2
Gene description
EvC ciliary complex subunit 2
See related
Ensembl:ENSPREG00000001055
Gene type
protein coding
RefSeq status
MODEL
Organism
Poecilia reticulata
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Atherinomorphae; Cyprinodontiformes; Poeciliidae; Poeciliinae; Poecilia
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Genomic context

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Location:
chromosome: LG5
Exon count:
23
Annotation release Status Assembly LG Location
101 current Guppy_female_1.0+MT (GCF_000633615.1) LG5 NC_024335.1 (19126271..19139263, complement)

Linkage Group LG5 - NC_024335.1Genomic Context describing neighboring genes Neighboring gene muscle segment homeobox 1a Neighboring gene cytokine like 1 Neighboring gene EvC ciliary complex subunit 1 Neighboring gene membrane integral NOTCH2 associated receptor 1

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_024335.1 Chromosome LG5 Reference Guppy_female_1.0+MT Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in smoothened signaling pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in ciliary membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of plasma membrane protein complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
limbin
Names
Ellis van Creveld syndrome 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Poecilia reticulata Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Guppy_female_1.0+MT Primary Assembly

Genomic

  1. NC_024335.1 Reference Guppy_female_1.0+MT Primary Assembly

    Range
    19126271..19139263 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_008409396.2 → XP_008407618.1  limbin isoform X2

    UniProtKB/TrEMBL
    A0A3P9MW35, A0A3P9MW87
    Related
    ENSPREP00000001516.1, ENSPRET00000001557.1
    Conserved Domains (3) summary
    COG1196
    Location:425 → 1180
    Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
    pfam12297
    Location:242 → 666
    EVC2_like; Ellis van Creveld protein 2 like protein
    cl12013
    Location:886 → 1025
    BAR; The Bin/Amphiphysin/Rvs (BAR) domain, a dimerization module that binds membranes and detects membrane curvature

  2. XM_008409395.2 → XP_008407617.1  limbin isoform X1

    UniProtKB/TrEMBL
    A0A3P9MW87
    Conserved Domains (3) summary
    COG1196
    Location:425 → 1181
    Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
    pfam12297
    Location:242 → 667
    EVC2_like; Ellis van Creveld protein 2 like protein
    cl12013
    Location:887 → 1026
    BAR; The Bin/Amphiphysin/Rvs (BAR) domain, a dimerization module that binds membranes and detects membrane curvature
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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