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cebpa CCAAT enhancer binding protein alpha [ Poecilia reticulata (guppy) ]

Gene ID: 103460084, updated on 11-Mar-2024

Summary

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Gene symbol
cebpa
Gene description
CCAAT enhancer binding protein alpha
See related
Ensembl:ENSPREG00000008310
Gene type
protein coding
RefSeq status
MODEL
Organism
Poecilia reticulata
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Atherinomorphae; Cyprinodontiformes; Poeciliidae; Poeciliinae; Poecilia
Orthologs
human zebrafish all
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Genomic context

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Location:
chromosome: Un
Exon count:
1
Annotation release Status Assembly Chr Location
101 current Guppy_female_1.0+MT (GCF_000633615.1) Unplaced Scaffold NW_007615018.1 (196777..198530, complement)

NW_007615018.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC103460081 Neighboring gene uncharacterized LOC103460083 Neighboring gene CCAAT enhancer binding protein gamma Neighboring gene formin homology 2 domain containing 1

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_007615018.1 Unplaced Scaffold Reference Guppy_female_1.0+MT Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in DNA-templated transcription IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in myeloid cell differentiation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
CCAAT/enhancer-binding protein alpha
Names
CCAAT/enhancer binding protein (C/EBP), alpha

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Poecilia reticulata Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Guppy_female_1.0+MT Primary Assembly

Genomic

  1. NW_007615018.1 Reference Guppy_female_1.0+MT Primary Assembly

    Range
    196777..198530 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_008402072.2 → XP_008400294.1  CCAAT/enhancer-binding protein alpha

    UniProtKB/TrEMBL
    A0A3P9NRP2
    Related
    ENSPREP00000012241.1, ENSPRET00000012374.1
    Conserved Domains (1) summary
    cd14712
    Location:222 → 292
    bZIP_CEBPB; Basic leucine zipper (bZIP) domain of CCAAT/enhancer-binding protein beta (CEBPB): a DNA-binding and dimerization domain
Nucleotide Protein
Heading Accession and Version

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