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myb v-myb avian myeloblastosis viral oncogene homolog [ Poecilia reticulata (guppy) ]

Gene ID: 103457669, updated on 11-Mar-2024

Summary

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Gene symbol
myb
Gene description
v-myb avian myeloblastosis viral oncogene homolog
See related
Ensembl:ENSPREG00000011303
Gene type
protein coding
RefSeq status
MODEL
Organism
Poecilia reticulata
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Atherinomorphae; Cyprinodontiformes; Poeciliidae; Poeciliinae; Poecilia
Orthologs
human zebrafish all
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Genomic context

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Location:
chromosome: LG21
Exon count:
15
Annotation release Status Assembly LG Location
101 current Guppy_female_1.0+MT (GCF_000633615.1) LG21 NC_024351.1 (13734131..13743858)

Linkage Group LG21 - NC_024351.1Genomic Context describing neighboring genes Neighboring gene aldehyde dehydrogenase 8 family, member A1 Neighboring gene HBS1-like translational GTPase Neighboring gene phosphodiesterase 7B Neighboring gene mitochondrial fission regulator 2 Neighboring gene armadillo repeat containing 1, like

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_024351.1 Chromosome LG21 Reference Guppy_female_1.0+MT Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of DNA-templated transcription IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
transcriptional activator Myb
Names
MYB proto-oncogene, transcription factor

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Poecilia reticulata Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Guppy_female_1.0+MT Primary Assembly

Genomic

  1. NC_024351.1 Reference Guppy_female_1.0+MT Primary Assembly

    Range
    13734131..13743858
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_008397968.2 → XP_008396190.1  transcriptional activator Myb isoform X3

    Conserved Domains (5) summary
    smart00717
    Location:92 → 140
    SANT; SANT SWI3, ADA2, N-CoR and TFIIIB'' DNA-binding domains
    pfam00249
    Location:92 → 138
    Myb_DNA-binding; Myb-like DNA-binding domain
    pfam07988
    Location:260 → 301
    LMSTEN; LMSTEN motif
    pfam09316
    Location:414 → 519
    Cmyb_C; C-myb, C-terminal
    pfam13921
    Location:43 → 103
    Myb_DNA-bind_6; Myb-like DNA-binding domain

  2. XM_008397967.2 → XP_008396189.1  transcriptional activator Myb isoform X1

    UniProtKB/TrEMBL
    A0A3P9P4F6
    Related
    ENSPREP00000016706.1, ENSPRET00000016886.1
    Conserved Domains (5) summary
    smart00717
    Location:92 → 140
    SANT; SANT SWI3, ADA2, N-CoR and TFIIIB'' DNA-binding domains
    pfam00249
    Location:92 → 138
    Myb_DNA-binding; Myb-like DNA-binding domain
    pfam07988
    Location:260 → 301
    LMSTEN; LMSTEN motif
    pfam09316
    Location:414 → 519
    Cmyb_C; C-myb, C-terminal
    pfam13921
    Location:43 → 103
    Myb_DNA-bind_6; Myb-like DNA-binding domain

  3. XM_017302058.1 → XP_017157547.1  transcriptional activator Myb isoform X2

Nucleotide Protein
Heading Accession and Version

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