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snx3 sorting nexin 3 [ Poecilia reticulata (guppy) ]

Gene ID: 103457490, updated on 11-Mar-2024

Summary

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Gene symbol
snx3
Gene description
sorting nexin 3
See related
Ensembl:ENSPREG00000005216
Gene type
protein coding
RefSeq status
MODEL
Organism
Poecilia reticulata
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Atherinomorphae; Cyprinodontiformes; Poeciliidae; Poeciliinae; Poecilia
Orthologs
human zebrafish all
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Genomic context

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Location:
chromosome: LG21
Exon count:
4
Annotation release Status Assembly LG Location
101 current Guppy_female_1.0+MT (GCF_000633615.1) LG21 NC_024351.1 (9340992..9354007)

Linkage Group LG21 - NC_024351.1Genomic Context describing neighboring genes Neighboring gene forkhead box O3b Neighboring gene uncharacterized LOC103457487 Neighboring gene AFG1 like ATPase b Neighboring gene nuclear receptor subfamily 2, group E, member 1 Neighboring gene osteoclastogenesis associated transmembrane protein 1

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_024351.1 Chromosome LG21 Reference Guppy_female_1.0+MT Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables phosphatidylinositol-3-phosphate binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in endocytic recycling IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in late endosome to Golgi transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in early endosome membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of retromer complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
sorting nexin-3

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Poecilia reticulata Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Guppy_female_1.0+MT Primary Assembly

Genomic

  1. NC_024351.1 Reference Guppy_female_1.0+MT Primary Assembly

    Range
    9340992..9354007
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_008397659.2 → XP_008395881.1  sorting nexin-3

    See identical proteins and their annotated locations for XP_008395881.1

    UniProtKB/TrEMBL
    A0A3P9NDG2
    Related
    ENSPREP00000007600.1, ENSPRET00000007692.1
    Conserved Domains (1) summary
    cd07293
    Location:28 → 150
    PX_SNX3; The phosphoinositide binding Phox Homology domain of Sorting Nexin 3
Nucleotide Protein
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Gene LinkOut

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