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rnf19a ring finger protein 19A, RBR E3 ubiquitin protein ligase [ Cynoglossus semilaevis (tongue sole) ]

Gene ID: 103388905, updated on 11-Mar-2024

Summary

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Gene symbol
rnf19a
Gene description
ring finger protein 19A, RBR E3 ubiquitin protein ligase
Gene type
protein coding
RefSeq status
MODEL
Organism
Cynoglossus semilaevis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Carangaria; Pleuronectiformes; Pleuronectoidei; Cynoglossidae; Cynoglossinae; Cynoglossus
Orthologs
human zebrafish all
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Genomic context

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Location:
chromosome: 13
Exon count:
9
Annotation release Status Assembly Chr Location
102 current Cse_v1.0 (GCF_000523025.1) 13 NC_024319.1 (19296739..19304574, complement)

Chromosome 13 - NC_024319.1Genomic Context describing neighboring genes Neighboring gene F-box protein 43 Neighboring gene sperm associated antigen 1 Neighboring gene uncharacterized LOC112487921 Neighboring gene poly(A) binding protein cytoplasmic 1 Neighboring gene tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein zeta

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_024319.1 Chromosome 13 Reference Cse_v1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ubiquitin conjugating enzyme binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables ubiquitin protein ligase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables zinc ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in positive regulation of proteasomal ubiquitin-dependent protein catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein polyubiquitination IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in ubiquitin-dependent protein catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of ubiquitin ligase complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
E3 ubiquitin-protein ligase RNF19A

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Cynoglossus semilaevis Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Cse_v1.0 Primary Assembly

Genomic

  1. NC_024319.1 Reference Cse_v1.0 Primary Assembly

    Range
    19296739..19304574 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_017037748.2 → XP_016893237.1  E3 ubiquitin-protein ligase RNF19A

    UniProtKB/TrEMBL
    A0A3P8W2W7
    Conserved Domains (2) summary
    smart00647
    Location:206 → 271
    IBR; In Between Ring fingers
    pfam01485
    Location:304 → 342
    IBR; IBR domain, a half RING-finger domain
Nucleotide Protein
Heading Accession and Version

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