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nhlrc1 NHL repeat containing E3 ubiquitin protein ligase 1 [ Cynoglossus semilaevis (tongue sole) ]

Gene ID: 103388369, updated on 22-Oct-2023

Summary

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Gene symbol
nhlrc1
Gene description
NHL repeat containing E3 ubiquitin protein ligase 1
See related
Ensembl:ENSCSEG00000004422
Gene type
protein coding
RefSeq status
MODEL
Organism
Cynoglossus semilaevis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Carangaria; Pleuronectiformes; Pleuronectoidei; Cynoglossidae; Cynoglossinae; Cynoglossus
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Genomic context

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Location:
chromosome: 13
Exon count:
1
Annotation release Status Assembly Chr Location
102 current Cse_v1.0 (GCF_000523025.1) 13 NC_024319.1 (8136498..8138374, complement)

Chromosome 13 - NC_024319.1Genomic Context describing neighboring genes Neighboring gene RNA binding motif protein 24b Neighboring gene kinesin family member 13A Neighboring gene phosphatidylserine synthase 1a Neighboring gene uncharacterized LOC103388371

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_024319.1 Chromosome 13 Reference Cse_v1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables translation repressor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables ubiquitin protein ligase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in negative regulation of translation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in proteasome-mediated ubiquitin-dependent protein catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein polyubiquitination IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
E3 ubiquitin-protein ligase NHLRC1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Cynoglossus semilaevis Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Cse_v1.0 Primary Assembly

Genomic

  1. NC_024319.1 Reference Cse_v1.0 Primary Assembly

    Range
    8136498..8138374 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_008323312.3 → XP_008321534.1  E3 ubiquitin-protein ligase NHLRC1

    UniProtKB/TrEMBL
    A0A3P8UYE0
    Related
    ENSCSEP00000006834.1, ENSCSET00000006909.1
    Conserved Domains (2) summary
    cd14961
    Location:132 → 409
    NHL_TRIM32_like; NHL repeat domain of the tripartite motif-containing protein 32 (TRIM32) and related proteins
    pfam14634
    Location:29 → 78
    zf-RING_5; zinc-RING finger domain
Nucleotide Protein
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