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synprb synaptoporin b [ Cynoglossus semilaevis (tongue sole) ]

Gene ID: 103385783, updated on 11-Mar-2024

Summary

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Gene symbol
synprb
Gene description
synaptoporin b
See related
Ensembl:ENSCSEG00000001065
Gene type
protein coding
RefSeq status
MODEL
Organism
Cynoglossus semilaevis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Carangaria; Pleuronectiformes; Pleuronectoidei; Cynoglossidae; Cynoglossinae; Cynoglossus
Also known as
synpr
Orthologs
zebrafish all
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Genomic context

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Location:
chromosome: 11
Exon count:
5
Annotation release Status Assembly Chr Location
102 current Cse_v1.0 (GCF_000523025.1) 11 NC_024317.1 (1827981..1830855)

Chromosome 11 - NC_024317.1Genomic Context describing neighboring genes Neighboring gene carbonic anhydrase XVI b Neighboring gene Ca2+-dependent activator protein for secretion b Neighboring gene green-sensitive opsin-like Neighboring gene green-sensitive opsin-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_024317.1 Chromosome 11 Reference Cse_v1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Component Evidence Code Pubs
located_in synaptic vesicle IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in synaptic vesicle membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
synaptoporin

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Cynoglossus semilaevis Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Cse_v1.0 Primary Assembly

Genomic

  1. NC_024317.1 Reference Cse_v1.0 Primary Assembly

    Range
    1827981..1830855
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_008319772.3 → XP_008317994.1  synaptoporin

    UniProtKB/TrEMBL
    A0A3P8UMU0
    Related
    ENSCSEP00000001570.1, ENSCSET00000001600.1
    Conserved Domains (1) summary
    pfam01284
    Location:73 → 196
    MARVEL; Membrane-associating domain
Nucleotide Protein
Heading Accession and Version

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