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amdhd1 amidohydrolase domain containing 1 [ Cynoglossus semilaevis (tongue sole) ]

Gene ID: 103382565, updated on 11-Mar-2024

Summary

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Gene symbol
amdhd1
Gene description
amidohydrolase domain containing 1
See related
Ensembl:ENSCSEG00000004613
Gene type
protein coding
RefSeq status
MODEL
Organism
Cynoglossus semilaevis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Carangaria; Pleuronectiformes; Pleuronectoidei; Cynoglossidae; Cynoglossinae; Cynoglossus
Orthologs
human zebrafish all
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Genomic context

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Location:
chromosome: 8
Exon count:
9
Annotation release Status Assembly Chr Location
102 current Cse_v1.0 (GCF_000523025.1) 8 NC_024314.1 (17900490..17904337)

Chromosome 8 - NC_024314.1Genomic Context describing neighboring genes Neighboring gene cryptochrome-1-like Neighboring gene ankyrin repeat and BTB/POZ domain-containing protein BTBD11-A-like Neighboring gene tetraspanin-9 Neighboring gene endosome-lysosome associated apoptosis and autophagy regulator family member 2b Neighboring gene kelch-like family, member 42

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_024314.1 Chromosome 8 Reference Cse_v1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables imidazolonepropionase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in histidine catabolic process to glutamate and formamide IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
probable imidazolonepropionase

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Cynoglossus semilaevis Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Cse_v1.0 Primary Assembly

Genomic

  1. NC_024314.1 Reference Cse_v1.0 Primary Assembly

    Range
    17900490..17904337
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_008315399.3 → XP_008313621.1  probable imidazolonepropionase

    UniProtKB/TrEMBL
    A0A3P8UXQ2
    Related
    ENSCSEP00000007142.1, ENSCSET00000007219.1
    Conserved Domains (2) summary
    COG1228
    Location:36 → 428
    HutI; Imidazolonepropionase or related amidohydrolase [Secondary metabolites biosynthesis, transport and catabolism]
    cd01296
    Location:43 → 420
    Imidazolone-5PH; Imidazolonepropionase/imidazolone-5-propionate hydrolase (Imidazolone-5PH) catalyzes the third step in the histidine degradation pathway, the hydrolysis of (S)-3-(5-oxo-4,5-dihydro-3H-imidazol-4-yl)propanoate to N-formimidoyl-L-glutamate. In bacteria, ...
Nucleotide Protein
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