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slco3a1a solute carrier organic anion transporter family member 3A1a [ Stegastes partitus (bicolor damselfish) ]

Gene ID: 103367514, updated on 11-Mar-2024

Summary

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Gene symbol
slco3a1a
Gene description
solute carrier organic anion transporter family member 3A1a
See related
Ensembl:ENSSPAG00000016368
Gene type
protein coding
RefSeq status
MODEL
Organism
Stegastes partitus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Pomacentridae; Stegastes
Also known as
slco3a1
Orthologs
zebrafish all
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Genomic context

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See slco3a1a in Genome Data Viewer
Location:
chromosome: Un
Exon count:
11
Annotation release Status Assembly Chr Location
100 current Stegastes_partitus-1.0.2 (GCF_000690725.1) Unplaced Scaffold NW_007578789.1 (18557..70826)

NW_007578789.1Genomic Context describing neighboring genes Neighboring gene Ras-related and estrogen-regulated growth inhibitor-like protein Neighboring gene ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 2 Neighboring gene family with sequence similarity 174 member B

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_007578789 unplaced scaffold reference Stegastes_partitus-1.0.2

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables sodium-independent organic anion transmembrane transporter activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in prostaglandin transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in sodium-independent organic anion transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in transmembrane transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
solute carrier organic anion transporter family member 3A1
Names
solute carrier organic anion transporter family, member 3A1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Stegastes partitus Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Stegastes_partitus-1.0.2

Genomic

  1. NW_007578789.1 Reference Stegastes_partitus-1.0.2

    Range
    18557..70826
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_008295549.1 → XP_008293771.1  solute carrier organic anion transporter family member 3A1

    See identical proteins and their annotated locations for XP_008293771.1

    UniProtKB/TrEMBL
    A0A3B5B7J5
    Conserved Domains (3) summary
    cd06174
    Location:41 → 277
    MFS; The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of ...
    cd01330
    Location:460 → 514
    KAZAL_SLC21; The kazal-type serine protease inhibitor domain has been detected in an extracellular loop region of solute carrier 21 (SLC21) family members (organic anion transporters) , which may regulate the specificity of anion uptake. The KAZAL_SLC21 domain is a ...
    pfam03137
    Location:35 → 623
    OATP; Organic Anion Transporter Polypeptide (OATP) family

  2. XM_008295550.1 → XP_008293772.1  solute carrier organic anion transporter family member 3A1

    See identical proteins and their annotated locations for XP_008293772.1

    UniProtKB/TrEMBL
    A0A3B5B7J5
    Conserved Domains (3) summary
    cd06174
    Location:41 → 277
    MFS; The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of ...
    cd01330
    Location:460 → 514
    KAZAL_SLC21; The kazal-type serine protease inhibitor domain has been detected in an extracellular loop region of solute carrier 21 (SLC21) family members (organic anion transporters) , which may regulate the specificity of anion uptake. The KAZAL_SLC21 domain is a ...
    pfam03137
    Location:35 → 623
    OATP; Organic Anion Transporter Polypeptide (OATP) family

  3. XM_008295547.1 → XP_008293769.1  solute carrier organic anion transporter family member 3A1

    See identical proteins and their annotated locations for XP_008293769.1

    UniProtKB/TrEMBL
    A0A3B5B7J5
    Related
    ENSSPAP00000021702.1, ENSSPAT00000022043.1
    Conserved Domains (3) summary
    cd06174
    Location:41 → 277
    MFS; The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of ...
    cd01330
    Location:460 → 514
    KAZAL_SLC21; The kazal-type serine protease inhibitor domain has been detected in an extracellular loop region of solute carrier 21 (SLC21) family members (organic anion transporters) , which may regulate the specificity of anion uptake. The KAZAL_SLC21 domain is a ...
    pfam03137
    Location:35 → 623
    OATP; Organic Anion Transporter Polypeptide (OATP) family
Nucleotide Protein
Heading Accession and Version

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