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zfhx2 zinc finger homeobox 2 [ Stegastes partitus (bicolor damselfish) ]

Gene ID: 103365360, updated on 11-Mar-2024

Summary

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Gene symbol
zfhx2
Gene description
zinc finger homeobox 2
Gene type
protein coding
RefSeq status
MODEL
Organism
Stegastes partitus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Pomacentridae; Stegastes
Orthologs
zebrafish all
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Genomic context

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See zfhx2 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
6
Annotation release Status Assembly Chr Location
100 current Stegastes_partitus-1.0.2 (GCF_000690725.1) Unplaced Scaffold NW_007578563.1 (58666..71126)

NW_007578563.1Genomic Context describing neighboring genes Neighboring gene ddb1 and cul4 associated factor 11 Neighboring gene thiamine triphosphatase Neighboring gene poly(A) binding protein, nuclear 1 Neighboring gene neuroguidin, EIF4E binding protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_007578563 unplaced scaffold reference Stegastes_partitus-1.0.2

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables zinc ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in brain development IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of neuron differentiation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
zinc finger homeobox protein 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Stegastes partitus Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Stegastes_partitus-1.0.2

Genomic

  1. NW_007578563.1 Reference Stegastes_partitus-1.0.2

    Range
    58666..71126
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_008292786.1 → XP_008291008.1  zinc finger homeobox protein 2 isoform X2

    UniProtKB/TrEMBL
    A0A9Y4KHT6
    Conserved Domains (2) summary
    smart00389
    Location:1415 → 1471
    HOX; Homeodomain
    pfam00046
    Location:1085 → 1138
    Homeobox; Homeobox domain

  2. XM_008292785.1 → XP_008291007.1  zinc finger homeobox protein 2 isoform X1

    UniProtKB/TrEMBL
    A0A9Y4KJU5
    Conserved Domains (2) summary
    smart00389
    Location:1423 → 1479
    HOX; Homeodomain
    pfam00046
    Location:1093 → 1146
    Homeobox; Homeobox domain
Nucleotide Protein
Heading Accession and Version

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