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slc1a1 solute carrier family 1 member 1 [ Stegastes partitus (bicolor damselfish) ]

Gene ID: 103361688, updated on 11-Mar-2024

Summary

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Gene symbol
slc1a1
Gene description
solute carrier family 1 member 1
See related
Ensembl:ENSSPAG00000006115
Gene type
protein coding
RefSeq status
MODEL
Organism
Stegastes partitus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Pomacentridae; Stegastes
Orthologs
human zebrafish all
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Genomic context

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Location:
chromosome: Un
Exon count:
12
Annotation release Status Assembly Chr Location
100 current Stegastes_partitus-1.0.2 (GCF_000690725.1) Unplaced Scaffold NW_007578255.1 (334701..353766, complement)

NW_007578255.1Genomic Context describing neighboring genes Neighboring gene chromosome unknown C4orf54 homolog Neighboring gene zinc-binding protein A33-like Neighboring gene tRNA methyltransferase 10A Neighboring gene zinc-binding protein A33-like Neighboring gene RAP1, GTP-GDP dissociation stimulator 1 Neighboring gene tetraspanin-5-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_007578255 unplaced scaffold reference Stegastes_partitus-1.0.2

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables L-glutamate transmembrane transporter activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables cysteine transmembrane transporter activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables glutamate:sodium symporter activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in L-glutamate transmembrane transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
excitatory amino acid transporter 3

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Stegastes partitus Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Stegastes_partitus-1.0.2

Genomic

  1. NW_007578255.1 Reference Stegastes_partitus-1.0.2

    Range
    334701..353766 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_008287835.1 → XP_008286057.1  excitatory amino acid transporter 3 isoform X1

    UniProtKB/TrEMBL
    A0A3B4ZP97, A0A9Y4KAL7
    Related
    ENSSPAP00000008129.1, ENSSPAT00000008284.1
    Conserved Domains (1) summary
    pfam00375
    Location:23 → 467
    SDF; Sodium:dicarboxylate symporter family

  2. XM_008287836.1 → XP_008286058.1  excitatory amino acid transporter 3 isoform X2

    UniProtKB/TrEMBL
    A0A3B4ZP97, A0A9Y4K840
    Conserved Domains (1) summary
    pfam00375
    Location:20 → 462
    SDF; Sodium:dicarboxylate symporter family
Nucleotide Protein
Heading Accession and Version

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