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zbtb8b zinc finger and BTB domain containing 8B [ Stegastes partitus (bicolor damselfish) ]

Gene ID: 103361504, updated on 11-Mar-2024

Summary

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Gene symbol
zbtb8b
Gene description
zinc finger and BTB domain containing 8B
See related
Ensembl:ENSSPAG00000019494
Gene type
protein coding
RefSeq status
MODEL
Organism
Stegastes partitus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Pomacentridae; Stegastes
Orthologs
human zebrafish all
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Genomic context

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See zbtb8b in Genome Data Viewer
Location:
chromosome: Un
Exon count:
5
Annotation release Status Assembly Chr Location
100 current Stegastes_partitus-1.0.2 (GCF_000690725.1) Unplaced Scaffold NW_007578240.1 (15633..22550, complement)

NW_007578240.1Genomic Context describing neighboring genes Neighboring gene hes related family bHLH transcription factor with YRPW motif like Neighboring gene coagulation factor XI-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_007578240 unplaced scaffold reference Stegastes_partitus-1.0.2

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
zinc finger and BTB domain-containing protein 8B

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Stegastes partitus Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Stegastes_partitus-1.0.2

Genomic

  1. NW_007578240.1 Reference Stegastes_partitus-1.0.2

    Range
    15633..22550 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_008287597.1 → XP_008285819.1  zinc finger and BTB domain-containing protein 8B

    UniProtKB/TrEMBL
    A0A3B5AWQ7
    Related
    ENSSPAP00000025803.1, ENSSPAT00000026227.1
    Conserved Domains (5) summary
    smart00225
    Location:25 → 123
    BTB; Broad-Complex, Tramtrack and Bric a brac
    sd00017
    Location:376 → 396
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam00651
    Location:14 → 119
    BTB; BTB/POZ domain
    pfam13465
    Location:389 → 413
    zf-H2C2_2; Zinc-finger double domain
    cl02614
    Location:395 → 453
    SPRY; SPRY domain
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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