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clpp caseinolytic mitochondrial matrix peptidase proteolytic subunit [ Stegastes partitus (bicolor damselfish) ]

Gene ID: 103360085, updated on 11-Mar-2024

Summary

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Gene symbol
clpp
Gene description
caseinolytic mitochondrial matrix peptidase proteolytic subunit
See related
Ensembl:ENSSPAG00000008805
Gene type
protein coding
RefSeq status
MODEL
Organism
Stegastes partitus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Pomacentridae; Stegastes
Orthologs
human zebrafish all
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Genomic context

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Location:
chromosome: Un
Exon count:
7
Annotation release Status Assembly Chr Location
100 current Stegastes_partitus-1.0.2 (GCF_000690725.1) Unplaced Scaffold NW_007578145.1 (420763..427386, complement)

NW_007578145.1Genomic Context describing neighboring genes Neighboring gene protein phosphatase 4 catalytic subunit Neighboring gene aldehyde dehydrogenase 3 family, member B1 Neighboring gene uncharacterized LOC103360086 Neighboring gene coactivator-associated arginine methyltransferase 1

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_007578145 unplaced scaffold reference Stegastes_partitus-1.0.2

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATP-dependent peptidase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables ATPase binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables serine-type endopeptidase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein quality control for misfolded or incompletely synthesized proteins IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of endopeptidase Clp complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
ATP-dependent Clp protease proteolytic subunit, mitochondrial

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Stegastes partitus Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Stegastes_partitus-1.0.2

Genomic

  1. NW_007578145.1 Reference Stegastes_partitus-1.0.2

    Range
    420763..427386 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_008285740.1 → XP_008283962.1  ATP-dependent Clp protease proteolytic subunit, mitochondrial

    UniProtKB/TrEMBL
    A0A3B4ZRR6, A0A9Y4N205
    Related
    ENSSPAP00000011583.1, ENSSPAT00000011788.1
    Conserved Domains (1) summary
    PRK00277
    Location:28 → 223
    clpP; ATP-dependent Clp protease proteolytic subunit; Reviewed
Nucleotide Protein
Heading Accession and Version

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