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adamts3 ADAM metallopeptidase with thrombospondin type 1 motif, 3 [ Stegastes partitus (bicolor damselfish) ]

Gene ID: 103358125, updated on 11-Mar-2024

Summary

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Gene symbol
adamts3
Gene description
ADAM metallopeptidase with thrombospondin type 1 motif, 3
See related
Ensembl:ENSSPAG00000020190
Gene type
protein coding
RefSeq status
MODEL
Organism
Stegastes partitus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Pomacentridae; Stegastes
Orthologs
human zebrafish all
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Genomic context

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See adamts3 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
21
Annotation release Status Assembly Chr Location
100 current Stegastes_partitus-1.0.2 (GCF_000690725.1) Unplaced Scaffold NW_007578022.1 (190495..446269)

NW_007578022.1Genomic Context describing neighboring genes Neighboring gene SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2 Neighboring gene transmembrane protein 176B-like Neighboring gene neuropeptide FF receptor 2a

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_007578022 unplaced scaffold reference Stegastes_partitus-1.0.2

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables metalloendopeptidase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in extracellular matrix organization IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in proteolysis IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in extracellular matrix IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
A disintegrin and metalloproteinase with thrombospondin motifs 3

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Stegastes partitus Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Stegastes_partitus-1.0.2

Genomic

  1. NW_007578022.1 Reference Stegastes_partitus-1.0.2

    Range
    190495..446269
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_008282959.1 → XP_008281181.1  A disintegrin and metalloproteinase with thrombospondin motifs 3

    UniProtKB/TrEMBL
    A0A3B5B0X4, A0A9Y4K258
    Related
    ENSSPAP00000026805.1, ENSSPAT00000027246.1
    Conserved Domains (5) summary
    smart00209
    Location:911 → 965
    TSP1; Thrombospondin type 1 repeats
    cd04273
    Location:244 → 445
    ZnMc_ADAMTS_like; Zinc-dependent metalloprotease, ADAMTS_like subgroup. ADAMs (A Disintegrin And Metalloprotease) are glycoproteins, which play roles in cell signaling, cell fusion, and cell-cell interactions. This particular subfamily represents domain architectures that ...
    pfam01421
    Location:246 → 448
    Reprolysin; Reprolysin (M12B) family zinc metalloprotease
    pfam01562
    Location:52 → 190
    Pep_M12B_propep; Reprolysin family propeptide
    pfam05986
    Location:657 → 771
    ADAM_spacer1; ADAM-TS Spacer 1
Nucleotide Protein
Heading Accession and Version

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