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tfap2b transcription factor AP-2 beta [ Stegastes partitus (bicolor damselfish) ]

Gene ID: 103355297, updated on 11-Mar-2024

Summary

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Gene symbol
tfap2b
Gene description
transcription factor AP-2 beta
See related
Ensembl:ENSSPAG00000016614
Gene type
protein coding
RefSeq status
MODEL
Organism
Stegastes partitus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Pomacentridae; Stegastes
Orthologs
human zebrafish all
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Genomic context

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See tfap2b in Genome Data Viewer
Location:
chromosome: Un
Exon count:
9
Annotation release Status Assembly Chr Location
100 current Stegastes_partitus-1.0.2 (GCF_000690725.1) Unplaced Scaffold NW_007577873.1 (481808..493891, complement)

NW_007577873.1Genomic Context describing neighboring genes Neighboring gene low density lipoprotein receptor-related protein 11 Neighboring gene mitogen-activated protein kinase kinase kinase 5 Neighboring gene transcription factor AP-2 delta (activating enhancer binding protein 2 delta) Neighboring gene hydroxyacyl-CoA dehydrogenase trifunctional multienzyme complex subunit beta

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_007577873 unplaced scaffold reference Stegastes_partitus-1.0.2

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables RNA polymerase II transcription regulatory region sequence-specific DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in anatomical structure development IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of cell population proliferation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
transcription factor AP-2-beta

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Stegastes partitus Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Stegastes_partitus-1.0.2

Genomic

  1. NW_007577873.1 Reference Stegastes_partitus-1.0.2

    Range
    481808..493891 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_008279036.1 → XP_008277258.1  transcription factor AP-2-beta isoform X1

    UniProtKB/TrEMBL
    A0A3B5ANI0
    Related
    ENSSPAP00000021991.1, ENSSPAT00000022339.1
    Conserved Domains (1) summary
    pfam03299
    Location:216 → 414
    TF_AP-2; Transcription factor AP-2

  2. XM_008279037.1 → XP_008277259.1  transcription factor AP-2-beta isoform X2

    UniProtKB/TrEMBL
    A0A9Y4MXH8
    Conserved Domains (1) summary
    pfam03299
    Location:221 → 419
    TF_AP-2; Transcription factor AP-2

  3. XM_008279038.1 → XP_008277260.1  transcription factor AP-2-beta isoform X3

    UniProtKB/TrEMBL
    A0A9Y4MYX9
    Conserved Domains (1) summary
    pfam03299
    Location:214 → 412
    TF_AP-2; Transcription factor AP-2
Nucleotide Protein
Heading Accession and Version

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