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OTUB2 OTU deubiquitinase, ubiquitin aldehyde binding 2 [ Eptesicus fuscus (big brown bat) ]

Gene ID: 103302907, updated on 30-Mar-2024

Summary

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Gene symbol
OTUB2
Gene description
OTU deubiquitinase, ubiquitin aldehyde binding 2
Gene type
protein coding
RefSeq status
MODEL
Organism
Eptesicus fuscus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Chiroptera; Yangochiroptera; Vespertilionidae; Eptesicus
Orthologs
human mouse all
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Genomic context

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See OTUB2 in Genome Data Viewer
Location:
chromosome: 5
Exon count:
6
Annotation release Status Assembly Chr Location
RS_2023_03 current DD_ASM_mEF_20220401 (GCF_027574615.1) 5 NC_072477.1 (7847687..7857609, complement)
101 previous assembly EptFus1.0 (GCF_000308155.1) Unplaced Scaffold NW_007370907.1 (93393..106254, complement)

Chromosome 5 - NC_072477.1Genomic Context describing neighboring genes Neighboring gene legumain Neighboring gene G-patch domain and KOW motifs-containing protein-like Neighboring gene interferon alpha-inducible protein 27-like protein 2 Neighboring gene DEAD-box helicase 24 Neighboring gene coiled-coil domain containing 197 Neighboring gene ankyrin repeat and SOCS box containing 2

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables cysteine-type deubiquitinase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables ubiquitin binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in negative regulation of double-strand break repair IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein K48-linked deubiquitination IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
ubiquitin thioesterase OTUB2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_027574615.1-RS_2023_03

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference DD_ASM_mEF_20220401

Genomic

  1. NC_072477.1 Reference DD_ASM_mEF_20220401

    Range
    7847687..7857609 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_008159948.3 → XP_008158170.1  ubiquitin thioesterase OTUB2

    Conserved Domains (1) summary
    pfam10275
    Location:1 → 229
    Peptidase_C65; Peptidase C65 Otubain
Nucleotide Protein
Heading Accession and Version

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