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SETDB1 SET domain bifurcated histone lysine methyltransferase 1 [ Eptesicus fuscus (big brown bat) ]

Gene ID: 103298980, updated on 30-Mar-2024

Summary

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Gene symbol
SETDB1
Gene description
SET domain bifurcated histone lysine methyltransferase 1
Gene type
protein coding
RefSeq status
MODEL
Organism
Eptesicus fuscus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Chiroptera; Yangochiroptera; Vespertilionidae; Eptesicus
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 22
Exon count:
22
Annotation release Status Assembly Chr Location
RS_2023_03 current DD_ASM_mEF_20220401 (GCF_027574615.1) 22 NC_072494.1 (13749587..13772668, complement)
101 previous assembly EptFus1.0 (GCF_000308155.1) Unplaced Scaffold NW_007370775.1 (3348286..3371913)

Chromosome 22 - NC_072494.1Genomic Context describing neighboring genes Neighboring gene annexin A9 Neighboring gene ceramide synthase 2 Neighboring gene 39S ribosomal protein L42, mitochondrial-like Neighboring gene 60S ribosomal protein L4-like Neighboring gene cortexin domain containing 2 Neighboring gene aryl hydrocarbon receptor nuclear translocator

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables histone H3K9 methyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables zinc ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in heterochromatin organization IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in negative regulation of gene expression IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in positive regulation of DNA methylation-dependent heterochromatin formation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
histone-lysine N-methyltransferase SETDB1
Names
SET domain bifurcated 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_027574615.1-RS_2023_03

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference DD_ASM_mEF_20220401

Genomic

  1. NC_072494.1 Reference DD_ASM_mEF_20220401

    Range
    13749587..13772668 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_008155844.3 → XP_008154066.3  histone-lysine N-methyltransferase SETDB1

  2. XM_028131658.2 → XP_027987459.2  histone-lysine N-methyltransferase SETDB1

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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