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EGR3 early growth response 3 [ Eptesicus fuscus (big brown bat) ]

Gene ID: 103295066, updated on 30-Mar-2024

Summary

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Gene symbol
EGR3
Gene description
early growth response 3
Gene type
protein coding
RefSeq status
MODEL
Organism
Eptesicus fuscus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Chiroptera; Yangochiroptera; Vespertilionidae; Eptesicus
Orthologs
human mouse all
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Genomic context

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See EGR3 in Genome Data Viewer
Location:
chromosome: 6
Exon count:
3
Annotation release Status Assembly Chr Location
RS_2023_03 current DD_ASM_mEF_20220401 (GCF_027574615.1) 6 NC_072478.1 (13206695..13212216)
101 previous assembly EptFus1.0 (GCF_000308155.1) Unplaced Scaffold NW_007370718.1 (7050244..7055992)

Chromosome 6 - NC_072478.1Genomic Context describing neighboring genes Neighboring gene Rho related BTB domain containing 2 Neighboring gene phosphatidylethanolamine binding protein 4 Neighboring gene small nucleolar RNA SNORA71 Neighboring gene bridging integrator 3

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
early growth response protein 3

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_027574615.1-RS_2023_03

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference DD_ASM_mEF_20220401

Genomic

  1. NC_072478.1 Reference DD_ASM_mEF_20220401

    Range
    13206695..13212216
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_008151479.3 → XP_008149701.1  early growth response protein 3 isoform X1

    Conserved Domains (5) summary
    COG5048
    Location:303 → 359
    COG5048; FOG: Zn-finger [General function prediction only]
    sd00017
    Location:277 → 299
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam00096
    Location:275 → 299
    zf-C2H2; Zinc finger, C2H2 type
    pfam11928
    Location:87 → 147
    DUF3446; Domain of unknown function (DUF3446)
    pfam13465
    Location:319 → 344
    zf-H2C2_2; Zinc-finger double domain

  2. XM_008151480.3 → XP_008149702.1  early growth response protein 3 isoform X2

    Conserved Domains (5) summary
    COG5048
    Location:265 → 321
    COG5048; FOG: Zn-finger [General function prediction only]
    sd00017
    Location:239 → 261
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam00096
    Location:237 → 261
    zf-C2H2; Zinc finger, C2H2 type
    pfam11928
    Location:49 → 109
    DUF3446; Domain of unknown function (DUF3446)
    pfam13465
    Location:281 → 306
    zf-H2C2_2; Zinc-finger double domain
Nucleotide Protein
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