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ERGIC1 endoplasmic reticulum-golgi intermediate compartment 1 [ Eptesicus fuscus (big brown bat) ]

Gene ID: 103291617, updated on 30-Mar-2024

Summary

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Gene symbol
ERGIC1
Gene description
endoplasmic reticulum-golgi intermediate compartment 1
Gene type
protein coding
RefSeq status
MODEL
Organism
Eptesicus fuscus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Chiroptera; Yangochiroptera; Vespertilionidae; Eptesicus
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 6
Exon count:
14
Annotation release Status Assembly Chr Location
RS_2023_03 current DD_ASM_mEF_20220401 (GCF_027574615.1) 6 NC_072478.1 (103523217..103608734)
101 previous assembly EptFus1.0 (GCF_000308155.1) Unplaced Scaffold NW_007370693.1 (1410979..1478520, complement)

Chromosome 6 - NC_072478.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC129149353 Neighboring gene dual specificity phosphatase 1 Neighboring gene uncharacterized LOC129149518 Neighboring gene uncharacterized LOC129149519 Neighboring gene ribosomal protein L26 like 1 Neighboring gene ATPase H+ transporting V0 subunit e1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in endoplasmic reticulum to Golgi vesicle-mediated transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in retrograde vesicle-mediated transport, Golgi to endoplasmic reticulum IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in COPII-coated ER to Golgi transport vesicle IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in Golgi membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in endoplasmic reticulum IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in endoplasmic reticulum membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
endoplasmic reticulum-Golgi intermediate compartment protein 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_027574615.1-RS_2023_03

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference DD_ASM_mEF_20220401

Genomic

  1. NC_072478.1 Reference DD_ASM_mEF_20220401

    Range
    103523217..103608734
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_054718148.1 → XP_054574123.1  endoplasmic reticulum-Golgi intermediate compartment protein 1 isoform X2

  2. XM_054718149.1 → XP_054574124.1  endoplasmic reticulum-Golgi intermediate compartment protein 1 isoform X3

  3. XM_054718147.1 → XP_054574122.1  endoplasmic reticulum-Golgi intermediate compartment protein 1 isoform X1

  4. XM_054718150.1 → XP_054574125.1  endoplasmic reticulum-Golgi intermediate compartment protein 1 isoform X4

  5. XM_054718151.1 → XP_054574126.1  endoplasmic reticulum-Golgi intermediate compartment protein 1 isoform X5

Nucleotide Protein
Heading Accession and Version

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