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ZBTB20 zinc finger and BTB domain containing 20 [ Carlito syrichta (Philippine tarsier) ]

Gene ID: 103268307, updated on 11-Mar-2024

Summary

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Gene symbol
ZBTB20
Gene description
zinc finger and BTB domain containing 20
See related
Ensembl:ENSTSYG00000009685
Gene type
protein coding
RefSeq status
MODEL
Organism
Carlito syrichta
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Tarsiiformes; Tarsiidae; Carlito
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
7
Annotation release Status Assembly Chr Location
101 current Tarsius_syrichta-2.0.1 (GCF_000164805.1) Unplaced Scaffold NW_007252911.1 (521840..640227, complement)

NW_007252911.1Genomic Context describing neighboring genes Neighboring gene dopamine receptor D3 Neighboring gene T cell immunoreceptor with Ig and ITIM domains

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_007252911 Unplaced Scaffold Reference Tarsius_syrichta-2.0.1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
zinc finger and BTB domain-containing protein 20

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Carlito syrichta Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Tarsius_syrichta-2.0.1 Primary Assembly

Genomic

  1. NW_007252911.1 Reference Tarsius_syrichta-2.0.1 Primary Assembly

    Range
    521840..640227 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_008065861.2 → XP_008064052.1  zinc finger and BTB domain-containing protein 20

    See identical proteins and their annotated locations for XP_008064052.1

    UniProtKB/TrEMBL
    A0A1U7UFJ1
    Conserved Domains (6) summary
    smart00225
    Location:105 → 196
    BTB; Broad-Complex, Tramtrack and Bric a brac
    COG5048
    Location:504 → 646
    COG5048; FOG: Zn-finger [General function prediction only]
    sd00017
    Location:579 → 599
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam00096
    Location:633 → 655
    zf-C2H2; Zinc finger, C2H2 type
    pfam00651
    Location:94 → 192
    BTB; BTB/POZ domain
    pfam13465
    Location:647 → 672
    zf-H2C2_2; Zinc-finger double domain

  2. XM_008065862.1 → XP_008064053.1  zinc finger and BTB domain-containing protein 20

    See identical proteins and their annotated locations for XP_008064053.1

    UniProtKB/TrEMBL
    A0A1U7UFJ1
    Related
    ENSTSYP00000008884.2, ENSTSYT00000009685.2
    Conserved Domains (6) summary
    smart00225
    Location:105 → 196
    BTB; Broad-Complex, Tramtrack and Bric a brac
    COG5048
    Location:504 → 646
    COG5048; FOG: Zn-finger [General function prediction only]
    sd00017
    Location:579 → 599
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam00096
    Location:633 → 655
    zf-C2H2; Zinc finger, C2H2 type
    pfam00651
    Location:94 → 192
    BTB; BTB/POZ domain
    pfam13465
    Location:647 → 672
    zf-H2C2_2; Zinc-finger double domain
Nucleotide Protein
Heading Accession and Version

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