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RPRD2 regulation of nuclear pre-mRNA domain containing 2 [ Carlito syrichta (Philippine tarsier) ]

Gene ID: 103265775, updated on 11-Mar-2024

Summary

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Gene symbol
RPRD2
Gene description
regulation of nuclear pre-mRNA domain containing 2
Gene type
protein coding
RefSeq status
MODEL
Organism
Carlito syrichta
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Tarsiiformes; Tarsiidae; Carlito
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
12
Annotation release Status Assembly Chr Location
101 current Tarsius_syrichta-2.0.1 (GCF_000164805.1) Unplaced Scaffold NW_007250933.1 (77163..178363, complement)

NW_007250933.1Genomic Context describing neighboring genes Neighboring gene extracellular matrix protein 1 Neighboring gene threonyl-tRNA synthetase 2, mitochondrial Neighboring gene pre-mRNA processing factor 3 Neighboring gene mitochondrial ribosomal protein S21

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_007250933 Unplaced Scaffold Reference Tarsius_syrichta-2.0.1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables RNA polymerase II C-terminal domain binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in mRNA 3'-end processing IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of RNA polymerase II, holoenzyme IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
regulation of nuclear pre-mRNA domain-containing protein 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Carlito syrichta Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Tarsius_syrichta-2.0.1 Primary Assembly

Genomic

  1. NW_007250933.1 Reference Tarsius_syrichta-2.0.1 Primary Assembly

    Range
    77163..178363 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_008063423.2 → XP_008061614.1  regulation of nuclear pre-mRNA domain-containing protein 2 isoform X2

    UniProtKB/TrEMBL
    A0A1U7TNN4
    Conserved Domains (1) summary
    smart00582
    Location:27 → 145
    RPR; domain present in proteins, which are involved in regulation of nuclear pre-mRNA

  2. XM_021715206.1 → XP_021570881.1  regulation of nuclear pre-mRNA domain-containing protein 2 isoform X1

    UniProtKB/TrEMBL
    A0A3Q0E5N9
    Conserved Domains (4) summary
    smart00582
    Location:27 → 145
    RPR; domain present in proteins, which are involved in regulation of nuclear pre-mRNA
    cl00341
    Location:652 → 741
    IGPD; Imidazoleglycerol-phosphate dehydratase
    cl25496
    Location:319 → 673
    Herpes_BLLF1; Herpes virus major outer envelope glycoprotein (BLLF1)
    cl25732
    Location:142 → 318
    SMC_N; RecF/RecN/SMC N terminal domain
Nucleotide Protein
Heading Accession and Version

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