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IMP4 IMP U3 small nucleolar ribonucleoprotein 4 [ Carlito syrichta (Philippine tarsier) ]

Gene ID: 103261049, updated on 11-Mar-2024

Summary

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Gene symbol
IMP4
Gene description
IMP U3 small nucleolar ribonucleoprotein 4
Gene type
protein coding
RefSeq status
MODEL
Organism
Carlito syrichta
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Tarsiiformes; Tarsiidae; Carlito
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
7
Annotation release Status Assembly Chr Location
101 current Tarsius_syrichta-2.0.1 (GCF_000164805.1) Unplaced Scaffold NW_007247672.1 (130171..132275)

NW_007247672.1Genomic Context describing neighboring genes Neighboring gene transfer RNA glutamic acid (anticodon UUC) Neighboring gene coiled-coil domain containing 115 Neighboring gene protein tyrosine phosphatase non-receptor type 18

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_007247672 Unplaced Scaffold Reference Tarsius_syrichta-2.0.1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables rRNA primary transcript binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables snoRNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in rRNA processing IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of Mpp10 complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleolus IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of small-subunit processome IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
U3 small nucleolar ribonucleoprotein protein IMP4
Names
IMP4 homolog, U3 small nucleolar ribonucleoprotein
IMP4, U3 small nucleolar ribonucleoprotein

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Carlito syrichta Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Tarsius_syrichta-2.0.1 Primary Assembly

Genomic

  1. NW_007247672.1 Reference Tarsius_syrichta-2.0.1 Primary Assembly

    Range
    130171..132275
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_021712666.1 → XP_021568341.1  U3 small nucleolar ribonucleoprotein protein IMP4 isoform X2

    UniProtKB/TrEMBL
    A0A3Q0DYN9
    Conserved Domains (1) summary
    smart00879
    Location:60 → 211
    Brix; The Brix domain is found in a number of eukaryotic proteins

  2. XM_008058676.2 → XP_008056867.2  U3 small nucleolar ribonucleoprotein protein IMP4 isoform X1

    UniProtKB/TrEMBL
    A0A1U7TUW2
    Conserved Domains (1) summary
    smart00879
    Location:1 → 168
    Brix; The Brix domain is found in a number of eukaryotic proteins

  3. XM_021712665.1 → XP_021568340.1  U3 small nucleolar ribonucleoprotein protein IMP4 isoform X1

    UniProtKB/TrEMBL
    A0A1U7TUW2
    Conserved Domains (1) summary
    smart00879
    Location:1 → 168
    Brix; The Brix domain is found in a number of eukaryotic proteins
Nucleotide Protein
Heading Accession and Version

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