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TNFAIP6 TNF alpha induced protein 6 [ Carlito syrichta (Philippine tarsier) ]

Gene ID: 103259758, updated on 11-Mar-2024

Summary

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Gene symbol
TNFAIP6
Gene description
TNF alpha induced protein 6
See related
Ensembl:ENSTSYG00000029492
Gene type
protein coding
RefSeq status
MODEL
Organism
Carlito syrichta
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Tarsiiformes; Tarsiidae; Carlito
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
6
Annotation release Status Assembly Chr Location
101 current Tarsius_syrichta-2.0.1 (GCF_000164805.1) Unplaced Scaffold NW_007247105.1 (377498..401472)

NW_007247105.1Genomic Context describing neighboring genes Neighboring gene RNA binding motif protein 43 Neighboring gene N-myc and STAT interactor

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_007247105 Unplaced Scaffold Reference Tarsius_syrichta-2.0.1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables hyaluronic acid binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cell adhesion IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in negative regulation of inflammatory response IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in extracellular space IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
tumor necrosis factor-inducible gene 6 protein

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Carlito syrichta Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Tarsius_syrichta-2.0.1 Primary Assembly

Genomic

  1. NW_007247105.1 Reference Tarsius_syrichta-2.0.1 Primary Assembly

    Range
    377498..401472
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_008057419.1 → XP_008055610.1  tumor necrosis factor-inducible gene 6 protein

    UniProtKB/TrEMBL
    A0A1U7TCQ9
    Related
    ENSTSYP00000019486.1, ENSTSYT00000027753.1
    Conserved Domains (2) summary
    cd03515
    Location:36 → 128
    Link_domain_TSG_6_like; This is the extracellular link domain of the type found in human TSG-6. The link domain is a hyaluronan (HA)-binding domain. TSG-6 is the protein product of tumor necrosis factor-stimulated gene-6. TSG-6 is up-regulated in inflammatory lesions and in the ...
    pfam00431
    Location:135 → 244
    CUB; CUB domain
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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