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NR5A1 nuclear receptor subfamily 5 group A member 1 [ Chlorocebus sabaeus (green monkey) ]

Gene ID: 103239887, updated on 11-Mar-2024

Summary

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Gene symbol
NR5A1
Gene description
nuclear receptor subfamily 5 group A member 1
See related
Ensembl:ENSCSAG00000013558
Gene type
protein coding
RefSeq status
MODEL
Organism
Chlorocebus sabaeus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Chlorocebus
Orthologs
human mouse all
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Genomic context

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See NR5A1 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
11
Annotation release Status Assembly Chr Location
102 current Vero_WHO_p1.0 (GCF_015252025.1) Unplaced Scaffold NW_023666079.1 (2411630..2438042, complement)
100 previous assembly Chlorocebus_sabeus 1.1 (GCF_000409795.2) 12 NC_023653.1 (13640453..13666748)

NW_023666079.1Genomic Context describing neighboring genes Neighboring gene proteasome 20S subunit beta 7 Neighboring gene adhesion G protein-coupled receptor D2 Neighboring gene nuclear receptor subfamily 6 group A member 1 Neighboring gene ran-specific GTPase-activating protein-like Neighboring gene olfactomedin like 2A

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables nuclear receptor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables zinc ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in hormone-mediated signaling pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in tissue development IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of RNA polymerase II transcription regulator complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
steroidogenic factor 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Chlorocebus sabaeus Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Vero_WHO_p1.0

Genomic

  1. NW_023666079.1 Reference Vero_WHO_p1.0

    Range
    2411630..2438042 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_008006277.2 → XP_008004468.1  steroidogenic factor 1

    See identical proteins and their annotated locations for XP_008004468.1

    UniProtKB/TrEMBL
    A0A0D9RM81
    Related
    ENSCSAP00000009720.1
    Conserved Domains (3) summary
    cd07070
    Location:223 → 459
    NR_LBD_SF-1; The ligand binding domain of nuclear receptor steroidogenic factor 1, a member of nuclear receptor superfamily
    cd07167
    Location:13 → 105
    NR_DBD_Lrh-1_like; The DNA-binding domain of Lrh-1 like nuclear receptor family like is composed of two C4-type zinc fingers
    PHA03247
    Location:137 → 216
    PHA03247; large tegument protein UL36; Provisional

  2. XM_008006278.2 → XP_008004469.1  steroidogenic factor 1

    See identical proteins and their annotated locations for XP_008004469.1

    UniProtKB/TrEMBL
    A0A0D9RM81
    Conserved Domains (3) summary
    cd07070
    Location:223 → 459
    NR_LBD_SF-1; The ligand binding domain of nuclear receptor steroidogenic factor 1, a member of nuclear receptor superfamily
    cd07167
    Location:13 → 105
    NR_DBD_Lrh-1_like; The DNA-binding domain of Lrh-1 like nuclear receptor family like is composed of two C4-type zinc fingers
    PHA03247
    Location:137 → 216
    PHA03247; large tegument protein UL36; Provisional

  3. XM_008006282.2 → XP_008004473.1  steroidogenic factor 1

    See identical proteins and their annotated locations for XP_008004473.1

    UniProtKB/TrEMBL
    A0A0D9RM81
    Conserved Domains (3) summary
    cd07070
    Location:223 → 459
    NR_LBD_SF-1; The ligand binding domain of nuclear receptor steroidogenic factor 1, a member of nuclear receptor superfamily
    cd07167
    Location:13 → 105
    NR_DBD_Lrh-1_like; The DNA-binding domain of Lrh-1 like nuclear receptor family like is composed of two C4-type zinc fingers
    PHA03247
    Location:137 → 216
    PHA03247; large tegument protein UL36; Provisional

  4. XM_008006281.2 → XP_008004472.1  steroidogenic factor 1

    See identical proteins and their annotated locations for XP_008004472.1

    UniProtKB/TrEMBL
    A0A0D9RM81
    Conserved Domains (3) summary
    cd07070
    Location:223 → 459
    NR_LBD_SF-1; The ligand binding domain of nuclear receptor steroidogenic factor 1, a member of nuclear receptor superfamily
    cd07167
    Location:13 → 105
    NR_DBD_Lrh-1_like; The DNA-binding domain of Lrh-1 like nuclear receptor family like is composed of two C4-type zinc fingers
    PHA03247
    Location:137 → 216
    PHA03247; large tegument protein UL36; Provisional

  5. XM_008006283.2 → XP_008004474.1  steroidogenic factor 1

    See identical proteins and their annotated locations for XP_008004474.1

    UniProtKB/TrEMBL
    A0A0D9RM81
    Conserved Domains (3) summary
    cd07070
    Location:223 → 459
    NR_LBD_SF-1; The ligand binding domain of nuclear receptor steroidogenic factor 1, a member of nuclear receptor superfamily
    cd07167
    Location:13 → 105
    NR_DBD_Lrh-1_like; The DNA-binding domain of Lrh-1 like nuclear receptor family like is composed of two C4-type zinc fingers
    PHA03247
    Location:137 → 216
    PHA03247; large tegument protein UL36; Provisional
Nucleotide Protein
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