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LIMA1 LIM domain and actin binding 1 [ Chlorocebus sabaeus (green monkey) ]

Gene ID: 103238300, updated on 11-Mar-2024

Summary

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Gene symbol
LIMA1
Gene description
LIM domain and actin binding 1
See related
Ensembl:ENSCSAG00000005975
Gene type
protein coding
RefSeq status
MODEL
Organism
Chlorocebus sabaeus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Chlorocebus
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
11
Annotation release Status Assembly Chr Location
102 current Vero_WHO_p1.0 (GCF_015252025.1) Unplaced Scaffold NW_023666037.1 (199611967..199715309)
100 previous assembly Chlorocebus_sabeus 1.1 (GCF_000409795.2) 11 NC_023652.1 (46403808..46508278, complement)

NW_023666037.1Genomic Context describing neighboring genes Neighboring gene La ribonucleoprotein 4 Neighboring gene family with sequence similarity 186 member A Neighboring gene 60S ribosomal protein L26-like Neighboring gene U6 spliceosomal RNA Neighboring gene ceramide synthase 5 Neighboring gene developmental pluripotency-associated protein 3-like

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables actin filament binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in actin filament bundle assembly IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in actin cytoskeleton IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
LIM domain and actin-binding protein 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Chlorocebus sabaeus Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Vero_WHO_p1.0

Genomic

  1. NW_023666037.1 Reference Vero_WHO_p1.0

    Range
    199611967..199715309
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_008003216.2 → XP_008001407.2  LIM domain and actin-binding protein 1 isoform X1

    UniProtKB/TrEMBL
    A0A0D9R0Y7
    Conserved Domains (1) summary
    cd09485
    Location:391 → 443
    LIM_Eplin_alpha_beta; The Lim domain of Epithelial Protein Lost in Neoplasm (Eplin)

  2. XM_008003217.2 → XP_008001408.2  LIM domain and actin-binding protein 1 isoform X2

    UniProtKB/TrEMBL
    A0A0D9R0Y7
    Conserved Domains (1) summary
    cd09485
    Location:390 → 442
    LIM_Eplin_alpha_beta; The Lim domain of Epithelial Protein Lost in Neoplasm (Eplin)
Nucleotide Protein
Heading Accession and Version

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