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CACNA1D calcium voltage-gated channel subunit alpha1 D [ Chlorocebus sabaeus (green monkey) ]

Gene ID: 103227762, updated on 11-Mar-2024

Summary

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Gene symbol
CACNA1D
Gene description
calcium voltage-gated channel subunit alpha1 D
See related
Ensembl:ENSCSAG00000013020
Gene type
protein coding
RefSeq status
MODEL
Organism
Chlorocebus sabaeus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Chlorocebus
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
52
Annotation release Status Assembly Chr Location
102 current Vero_WHO_p1.0 (GCF_015252025.1) Unplaced Scaffold NW_023666041.1 (151696363..152023286, complement)
100 previous assembly Chlorocebus_sabeus 1.1 (GCF_000409795.2) 22 NC_023663.1 (14868459..15195002)

NW_023666041.1Genomic Context describing neighboring genes Neighboring gene interleukin 17 receptor B Neighboring gene choline dehydrogenase Neighboring gene 40S ribosomal protein S25-like Neighboring gene geranylgeranyl pyrophosphate synthase-like

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables high voltage-gated calcium channel activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in calcium ion import across plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of voltage-gated calcium channel complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
voltage-dependent L-type calcium channel subunit alpha-1D

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Chlorocebus sabaeus Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Vero_WHO_p1.0

Genomic

  1. NW_023666041.1 Reference Vero_WHO_p1.0

    Range
    151696363..152023286 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038003783.1 → XP_037859711.1  voltage-dependent L-type calcium channel subunit alpha-1D isoform X8

    UniProtKB/TrEMBL
    A0A0D9RKP5
    Conserved Domains (4) summary
    pfam00520
    Location:125 → 417
    Ion_trans; Ion transport protein
    pfam08763
    Location:1548 → 1619
    Ca_chan_IQ; Voltage gated calcium channel IQ domain
    pfam16885
    Location:1642 → 2158
    CAC1F_C; Voltage-gated calcium channel subunit alpha, C-term
    pfam16905
    Location:1484 → 1537
    GPHH; Voltage-dependent L-type calcium channel, IQ-associated

  2. XM_007984584.2 → XP_007982775.2  voltage-dependent L-type calcium channel subunit alpha-1D isoform X2

    UniProtKB/TrEMBL
    A0A0D9RKP5
    Conserved Domains (4) summary
    pfam00520
    Location:125 → 417
    Ion_trans; Ion transport protein
    pfam08763
    Location:1576 → 1696
    Ca_chan_IQ; Voltage gated calcium channel IQ domain
    pfam16885
    Location:1719 → 2235
    CAC1F_C; Voltage-gated calcium channel subunit alpha, C-term
    pfam16905
    Location:1512 → 1565
    GPHH; Voltage-dependent L-type calcium channel, IQ-associated

  3. XM_007984598.2 → XP_007982789.2  voltage-dependent L-type calcium channel subunit alpha-1D isoform X11

    UniProtKB/TrEMBL
    A0A0D9RKP5
    Conserved Domains (4) summary
    pfam00520
    Location:125 → 417
    Ion_trans; Ion transport protein
    pfam08763
    Location:1553 → 1624
    Ca_chan_IQ; Voltage gated calcium channel IQ domain
    pfam16885
    Location:1647 → 2163
    CAC1F_C; Voltage-gated calcium channel subunit alpha, C-term
    pfam16905
    Location:1489 → 1542
    GPHH; Voltage-dependent L-type calcium channel, IQ-associated

  4. XM_007984589.2 → XP_007982780.2  voltage-dependent L-type calcium channel subunit alpha-1D isoform X4

    UniProtKB/TrEMBL
    A0A0D9RKP5
    Conserved Domains (4) summary
    pfam00520
    Location:125 → 417
    Ion_trans; Ion transport protein
    pfam08763
    Location:1553 → 1673
    Ca_chan_IQ; Voltage gated calcium channel IQ domain
    pfam16885
    Location:1696 → 2212
    CAC1F_C; Voltage-gated calcium channel subunit alpha, C-term
    pfam16905
    Location:1489 → 1542
    GPHH; Voltage-dependent L-type calcium channel, IQ-associated

  5. XM_007984587.2 → XP_007982778.2  voltage-dependent L-type calcium channel subunit alpha-1D isoform X3

    UniProtKB/TrEMBL
    A0A0D9RKP5
    Conserved Domains (4) summary
    pfam00520
    Location:125 → 417
    Ion_trans; Ion transport protein
    pfam08763
    Location:1568 → 1688
    Ca_chan_IQ; Voltage gated calcium channel IQ domain
    pfam16885
    Location:1711 → 2227
    CAC1F_C; Voltage-gated calcium channel subunit alpha, C-term
    pfam16905
    Location:1504 → 1557
    GPHH; Voltage-dependent L-type calcium channel, IQ-associated

  6. XM_007984577.2 → XP_007982768.2  voltage-dependent L-type calcium channel subunit alpha-1D isoform X1

    UniProtKB/TrEMBL
    A0A0D9RKP5
    Conserved Domains (4) summary
    pfam00520
    Location:125 → 417
    Ion_trans; Ion transport protein
    pfam08763
    Location:1596 → 1716
    Ca_chan_IQ; Voltage gated calcium channel IQ domain
    pfam16885
    Location:1739 → 2255
    CAC1F_C; Voltage-gated calcium channel subunit alpha, C-term
    pfam16905
    Location:1532 → 1585
    GPHH; Voltage-dependent L-type calcium channel, IQ-associated

  7. XM_007984595.2 → XP_007982786.2  voltage-dependent L-type calcium channel subunit alpha-1D isoform X5

    UniProtKB/TrEMBL
    A0A0D9RKP5
    Conserved Domains (4) summary
    pfam00520
    Location:125 → 417
    Ion_trans; Ion transport protein
    pfam08763
    Location:1568 → 1639
    Ca_chan_IQ; Voltage gated calcium channel IQ domain
    pfam16885
    Location:1662 → 2178
    CAC1F_C; Voltage-gated calcium channel subunit alpha, C-term
    pfam16905
    Location:1504 → 1557
    GPHH; Voltage-dependent L-type calcium channel, IQ-associated

  8. XM_007984601.2 → XP_007982792.2  voltage-dependent L-type calcium channel subunit alpha-1D isoform X10

    UniProtKB/TrEMBL
    A0A0D9RKP5
    Conserved Domains (4) summary
    pfam00520
    Location:125 → 417
    Ion_trans; Ion transport protein
    pfam08763
    Location:1533 → 1604
    Ca_chan_IQ; Voltage gated calcium channel IQ domain
    pfam16885
    Location:1627 → 2134
    CAC1F_C; Voltage-gated calcium channel subunit alpha, C-term
    pfam16905
    Location:1469 → 1522
    GPHH; Voltage-dependent L-type calcium channel, IQ-associated

  9. XM_007984599.2 → XP_007982790.2  voltage-dependent L-type calcium channel subunit alpha-1D isoform X7

    UniProtKB/TrEMBL
    A0A0D9RKP5
    Conserved Domains (4) summary
    pfam00520
    Location:125 → 417
    Ion_trans; Ion transport protein
    pfam08763
    Location:1548 → 1619
    Ca_chan_IQ; Voltage gated calcium channel IQ domain
    pfam16885
    Location:1642 → 2158
    CAC1F_C; Voltage-gated calcium channel subunit alpha, C-term
    pfam16905
    Location:1484 → 1537
    GPHH; Voltage-dependent L-type calcium channel, IQ-associated

  10. XM_007984596.2 → XP_007982787.2  voltage-dependent L-type calcium channel subunit alpha-1D isoform X6

    UniProtKB/TrEMBL
    A0A0D9RKP5
    Conserved Domains (4) summary
    pfam00520
    Location:125 → 417
    Ion_trans; Ion transport protein
    pfam08763
    Location:1568 → 1639
    Ca_chan_IQ; Voltage gated calcium channel IQ domain
    pfam16885
    Location:1662 → 2178
    CAC1F_C; Voltage-gated calcium channel subunit alpha, C-term
    pfam16905
    Location:1504 → 1557
    GPHH; Voltage-dependent L-type calcium channel, IQ-associated

  11. XM_007984600.2 → XP_007982791.2  voltage-dependent L-type calcium channel subunit alpha-1D isoform X9

    UniProtKB/TrEMBL
    A0A0D9RKP5
    Conserved Domains (4) summary
    pfam00520
    Location:125 → 417
    Ion_trans; Ion transport protein
    pfam08763
    Location:1533 → 1604
    Ca_chan_IQ; Voltage gated calcium channel IQ domain
    pfam16885
    Location:1627 → 2143
    CAC1F_C; Voltage-gated calcium channel subunit alpha, C-term
    pfam16905
    Location:1469 → 1522
    GPHH; Voltage-dependent L-type calcium channel, IQ-associated
Nucleotide Protein
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