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TSPAN12 tetraspanin 12 [ Chlorocebus sabaeus (green monkey) ]

Gene ID: 103226789, updated on 11-Mar-2024

Summary

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Gene symbol
TSPAN12
Gene description
tetraspanin 12
See related
Ensembl:ENSCSAG00000010773
Gene type
protein coding
RefSeq status
MODEL
Organism
Chlorocebus sabaeus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Chlorocebus
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
10
Annotation release Status Assembly Chr Location
102 current Vero_WHO_p1.0 (GCF_015252025.1) Unplaced Scaffold NW_023666042.1 (13900003..13970881)
100 previous assembly Chlorocebus_sabeus 1.1 (GCF_000409795.2) 21 NC_023662.1 (89609229..89680446, complement)

NW_023666042.1Genomic Context describing neighboring genes Neighboring gene U6 spliceosomal RNA Neighboring gene cadherin like and PC-esterase domain containing 1 Neighboring gene inhibitor of growth family member 3 Neighboring gene U6 spliceosomal RNA Neighboring gene potassium voltage-gated channel subfamily D member 2 Neighboring gene U1 spliceosomal RNA

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
tetraspanin-12

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Chlorocebus sabaeus Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Vero_WHO_p1.0

Genomic

  1. NW_023666042.1 Reference Vero_WHO_p1.0

    Range
    13900003..13970881
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_007982707.2 → XP_007980898.1  tetraspanin-12

    See identical proteins and their annotated locations for XP_007980898.1

    UniProtKB/TrEMBL
    A0A0D9REF6
    Related
    ENSCSAP00000006995.1
    Conserved Domains (2) summary
    cd03157
    Location:116 → 218
    TM4SF12_like_LEL; Tetraspanin, extracellular domain or large extracellular loop (LEL), TM4SF12_like family. Tetraspanins are trans-membrane proteins with 4 trans-membrane segments. Both the N- and C-termini lie on the intracellular side of the membrane. This alignment ...
    pfam00335
    Location:10 → 244
    Tetraspannin; Tetraspanin family

  2. XM_038004440.1 → XP_037860368.1  tetraspanin-12

    UniProtKB/TrEMBL
    A0A0D9REF6
    Conserved Domains (2) summary
    cd03157
    Location:116 → 218
    TM4SF12_like_LEL; Tetraspanin, extracellular domain or large extracellular loop (LEL), TM4SF12_like family. Tetraspanins are trans-membrane proteins with 4 trans-membrane segments. Both the N- and C-termini lie on the intracellular side of the membrane. This alignment ...
    pfam00335
    Location:10 → 244
    Tetraspannin; Tetraspanin family

  3. XM_007982708.2 → XP_007980899.1  tetraspanin-12

    See identical proteins and their annotated locations for XP_007980899.1

    UniProtKB/TrEMBL
    A0A0D9REF6
    Conserved Domains (2) summary
    cd03157
    Location:116 → 218
    TM4SF12_like_LEL; Tetraspanin, extracellular domain or large extracellular loop (LEL), TM4SF12_like family. Tetraspanins are trans-membrane proteins with 4 trans-membrane segments. Both the N- and C-termini lie on the intracellular side of the membrane. This alignment ...
    pfam00335
    Location:10 → 244
    Tetraspannin; Tetraspanin family
Nucleotide Protein
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