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DEPDC1B DEP domain containing 1B [ Chlorocebus sabaeus (green monkey) ]

Gene ID: 103221934, updated on 11-Mar-2024

Summary

Gene symbol
DEPDC1B
Gene description
DEP domain containing 1B
See related
Ensembl:ENSCSAG00000016110
Gene type
protein coding
RefSeq status
MODEL
Organism
Chlorocebus sabaeus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Chlorocebus
Orthologs
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Genomic context

See DEPDC1B in Genome Data Viewer
Location:
chromosome: Un
Exon count:
11
Annotation release Status Assembly Chr Location
102 current Vero_WHO_p1.0 (GCF_015252025.1) Unplaced Scaffold NW_023666049.1 (5256122..5372172, complement)
100 previous assembly Chlorocebus_sabeus 1.1 (GCF_000409795.2) 4 NC_023645.1 (56770728..56882062, complement)

NW_023666049.1Genomic Context describing neighboring genes Neighboring gene protein SET-like Neighboring gene uncharacterized LOC103225112 Neighboring gene keratin, type II cytoskeletal 8-like Neighboring gene ELOVL fatty acid elongase 7 Neighboring gene non-histone chromosomal protein HMG-17-like

Genomic regions, transcripts, and products

General protein information

Preferred Names
DEP domain-containing protein 1B

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Chlorocebus sabaeus Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Vero_WHO_p1.0

Genomic

  1. NW_023666049.1 Reference Vero_WHO_p1.0

    Range
    5256122..5372172 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_007973400.2XP_007971591.2  DEP domain-containing protein 1B isoform X1

    UniProtKB/TrEMBL
    A0A0D9RU62
    Conserved Domains (2) summary
    cd04405
    Location:177400
    RhoGAP_BRCC3-like; RhoGAP (GTPase-activator protein [GAP] for Rho-like small GTPases) domain of BRCC3-like proteins. This subgroup also contains two groups of closely related proteins, BRCC3 and DEPDC7, which both contain a C-terminal RhoGAP-like domain and an N-terminal ...
    cd04447
    Location:15106
    DEP_BRCC3; DEP (Dishevelled, Egl-10, and Pleckstrin) domain found in BBRC3-like proteins. BBRC3, also known as DEPDC1B, is a DEP containing protein of unknown function.
  2. XM_007973406.2XP_007971597.2  DEP domain-containing protein 1B isoform X2

    UniProtKB/TrEMBL
    A0A0D9RU62
    Conserved Domains (2) summary
    cd04405
    Location:150373
    RhoGAP_BRCC3-like; RhoGAP (GTPase-activator protein [GAP] for Rho-like small GTPases) domain of BRCC3-like proteins. This subgroup also contains two groups of closely related proteins, BRCC3 and DEPDC7, which both contain a C-terminal RhoGAP-like domain and an N-terminal ...
    cl02442
    Location:179
    DEP; DEP domain, named after Dishevelled, Egl-10, and Pleckstrin, where this domain was first discovered. The function of this domain is still not clear, but it is believed to be important for the membrane association of the signaling proteins in which it is ...