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USP9X ubiquitin specific peptidase 9 X-linked [ Orycteropus afer afer ]

Gene ID: 103207858, updated on 11-Mar-2024

Summary

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Gene symbol
USP9X
Gene description
ubiquitin specific peptidase 9 X-linked
Gene type
protein coding
RefSeq status
MODEL
Organism
Orycteropus afer afer (sub-species: afer)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Afrotheria; Tubulidentata; Orycteropodidae; Orycteropus
Orthologs
human mouse all
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Genomic context

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See USP9X in Genome Data Viewer
Location:
chromosome: Un
Exon count:
45
Annotation release Status Assembly Chr Location
101 current OryAfe1.0 (GCF_000298275.1) Unplaced Scaffold NW_006921988.1 (384625..481883)

NW_006921988.1Genomic Context describing neighboring genes Neighboring gene U6 spliceosomal RNA Neighboring gene U6atac minor spliceosomal RNA Neighboring gene U6 spliceosomal RNA Neighboring gene U1 spliceosomal RNA

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_006921988 Unplaced Scaffold Reference OryAfe1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables cysteine-type deubiquitinase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables cysteine-type endopeptidase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cell migration IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein deubiquitination IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytosol IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
probable ubiquitin carboxyl-terminal hydrolase FAF-X

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Orycteropus afer afer Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference OryAfe1.0 Primary Assembly

Genomic

  1. NW_006921988.1 Reference OryAfe1.0 Primary Assembly

    Range
    384625..481883
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_042782641.1 → XP_042638575.1  probable ubiquitin carboxyl-terminal hydrolase FAF-X

    UniProtKB/TrEMBL
    A0A8B7AZC8
    Conserved Domains (2) summary
    cd02659
    Location:1509 → 1912
    peptidase_C19C; A subfamily of Peptidase C19. Peptidase C19 contains ubiquitinyl hydrolases. They are intracellular peptidases that remove ubiquitin molecules from polyubiquinated peptides by cleavage of isopeptide bonds. They hydrolyze bonds involving the carboxyl ...
    cl28922
    Location:854 → 918
    Ubiquitin_like_fold; Beta-grasp ubiquitin-like fold
Nucleotide Protein
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