U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

CACTIN cactin, spliceosome C complex subunit [ Orycteropus afer afer ]

Gene ID: 103205653, updated on 11-Mar-2024

Summary

Go to the top of the page Help
Gene symbol
CACTIN
Gene description
cactin, spliceosome C complex subunit
Gene type
protein coding
RefSeq status
MODEL
Organism
Orycteropus afer afer (sub-species: afer)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Afrotheria; Tubulidentata; Orycteropodidae; Orycteropus
Orthologs
human mouse all
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
Location:
chromosome: Un
Exon count:
10
Annotation release Status Assembly Chr Location
101 current OryAfe1.0 (GCF_000298275.1) Unplaced Scaffold NW_006921878.1 (2344786..2354048, complement)

NW_006921878.1Genomic Context describing neighboring genes Neighboring gene GIPC PDZ domain containing family member 3 Neighboring gene thromboxane A2 receptor Neighboring gene phosphatidylinositol-4-phosphate 5-kinase type 1 gamma Neighboring gene tight junction protein 3

Genomic regions, transcripts, and products

Go to the top of the page Help
Genomic Sequence:
NW_006921878 Unplaced Scaffold Reference OryAfe1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in mRNA cis splicing, via spliceosome IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in negative regulation of innate immune response IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of spliceosomal complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
cactin

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Orycteropus afer afer Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference OryAfe1.0 Primary Assembly

Genomic

  1. NW_006921878.1 Reference OryAfe1.0 Primary Assembly

    Range
    2344786..2354048 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_007951026.1 → XP_007949217.1  cactin

    UniProtKB/TrEMBL
    A0A8B7ANX8
    Conserved Domains (3) summary
    pfam09732
    Location:627 → 751
    CactinC_cactus; Cactus-binding C-terminus of cactin protein
    pfam10312
    Location:274 → 459
    Cactin_mid; Conserved mid region of cactin
    pfam14738
    Location:228 → 308
    PaaSYMP; Solute carrier (proton/amino acid symporter), TRAMD3 or PAT1
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.