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KRT1 keratin 1 [ Orycteropus afer afer ]

Gene ID: 103204362, updated on 11-Mar-2024

Summary

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Gene symbol
KRT1
Gene description
keratin 1
Gene type
protein coding
RefSeq status
MODEL
Organism
Orycteropus afer afer (sub-species: afer)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Afrotheria; Tubulidentata; Orycteropodidae; Orycteropus
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
9
Annotation release Status Assembly Chr Location
101 current OryAfe1.0 (GCF_000298275.1) Unplaced Scaffold NW_006921834.1 (3994285..3999440)

NW_006921834.1Genomic Context describing neighboring genes Neighboring gene keratin, type II cytoskeletal 3-like Neighboring gene keratin 77 Neighboring gene keratin 2 Neighboring gene keratin, type II cytoskeletal 73

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_006921834 Unplaced Scaffold Reference OryAfe1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables structural constituent of skin epidermis IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in intermediate filament organization IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in keratinization IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in extracellular space IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in keratin filament IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
keratin, type II cytoskeletal 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Orycteropus afer afer Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference OryAfe1.0 Primary Assembly

Genomic

  1. NW_006921834.1 Reference OryAfe1.0 Primary Assembly

    Range
    3994285..3999440
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_007949549.1 → XP_007947740.1  keratin, type II cytoskeletal 1

    UniProtKB/TrEMBL
    A0A8B7AIB5
    Conserved Domains (3) summary
    pfam00038
    Location:189 → 502
    Filament; Intermediate filament protein
    pfam16208
    Location:155 → 186
    Keratin_2_head; Keratin type II head
    pfam16210
    Location:611 → 627
    Keratin_2_tail; Keratin type II cytoskeletal 1 tail
Nucleotide Protein
Heading Accession and Version

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