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POU2F1 POU class 2 homeobox 1 [ Orycteropus afer afer ]

Gene ID: 103194347, updated on 11-Mar-2024

Summary

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Gene symbol
POU2F1
Gene description
POU class 2 homeobox 1
Gene type
protein coding
RefSeq status
MODEL
Organism
Orycteropus afer afer (sub-species: afer)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Afrotheria; Tubulidentata; Orycteropodidae; Orycteropus
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
16
Annotation release Status Assembly Chr Location
101 current OryAfe1.0 (GCF_000298275.1) Unplaced Scaffold NW_006921631.1 (6562925..6709457, complement)

NW_006921631.1Genomic Context describing neighboring genes Neighboring gene cellular repressor of E1A stimulated genes 1 Neighboring gene CD247 molecule Neighboring gene serine/threonine/tyrosine interacting like 2 Neighboring gene glycoprotein A33

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_006921631 Unplaced Scaffold Reference OryAfe1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
POU domain, class 2, transcription factor 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Orycteropus afer afer Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference OryAfe1.0 Primary Assembly

Genomic

  1. NW_006921631.1 Reference OryAfe1.0 Primary Assembly

    Range
    6562925..6709457 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_007937731.2 → XP_007935922.1  POU domain, class 2, transcription factor 1

    UniProtKB/TrEMBL
    A0A8B6ZJR0, A0A8B6ZLF2
    Conserved Domains (2) summary
    smart00352
    Location:292 → 366
    POU; Found in Pit-Oct-Unc transcription factors
    pfam00046
    Location:396 → 449
    Homeobox; Homeobox domain
Nucleotide Protein
Heading Accession and Version

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