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SFMBT2 Scm like with four mbt domains 2 [ Orycteropus afer afer ]

Gene ID: 103192459, updated on 11-Mar-2024

Summary

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Gene symbol
SFMBT2
Gene description
Scm like with four mbt domains 2
Gene type
protein coding
RefSeq status
MODEL
Organism
Orycteropus afer afer (sub-species: afer)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Afrotheria; Tubulidentata; Orycteropodidae; Orycteropus
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
20
Annotation release Status Assembly Chr Location
101 current OryAfe1.0 (GCF_000298275.1) Unplaced Scaffold NW_006921615.1 (16033743..16333550)

NW_006921615.1Genomic Context describing neighboring genes Neighboring gene U6 spliceosomal RNA Neighboring gene inter-alpha-trypsin inhibitor heavy chain 2 Neighboring gene inter-alpha-trypsin inhibitor heavy chain 5 Neighboring gene peptidyl-prolyl cis-trans isomerase A-like Neighboring gene protein kinase C theta

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_006921615 Unplaced Scaffold Reference OryAfe1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables histone binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables transcription corepressor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of DNA-templated transcription IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
scm-like with four MBT domains protein 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Orycteropus afer afer Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference OryAfe1.0 Primary Assembly

Genomic

  1. NW_006921615.1 Reference OryAfe1.0 Primary Assembly

    Range
    16033743..16333550
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_007935449.1 → XP_007933640.1  scm-like with four MBT domains protein 2

    UniProtKB/TrEMBL
    A0A8B6ZDC4
    Conserved Domains (4) summary
    cd09581
    Location:813 → 893
    SAM_Scm-like-4MBT1,2; SAM domain of Scm-like-4MBT1,2 proteins of Polycomb group
    smart00454
    Location:820 → 884
    SAM; Sterile alpha motif
    smart00561
    Location:48 → 144
    MBT; Present in Drosophila Scm, l(3)mbt, and vertebrate SCML2
    pfam12140
    Location:528 → 643
    DUF3588; Protein of unknown function (DUF3588)
Nucleotide Protein
Heading Accession and Version

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