U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

CBFA2T2 CBFA2/RUNX1 partner transcriptional co-repressor 2 [ Orycteropus afer afer ]

Gene ID: 103191720, updated on 11-Mar-2024

Summary

Go to the top of the page Help
Gene symbol
CBFA2T2
Gene description
CBFA2/RUNX1 partner transcriptional co-repressor 2
Gene type
protein coding
RefSeq status
MODEL
Organism
Orycteropus afer afer (sub-species: afer)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Afrotheria; Tubulidentata; Orycteropodidae; Orycteropus
Orthologs
human mouse all
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
Location:
chromosome: Un
Exon count:
10
Annotation release Status Assembly Chr Location
101 current OryAfe1.0 (GCF_000298275.1) Unplaced Scaffold NW_006921607.1 (9027704..9078939)

NW_006921607.1Genomic Context describing neighboring genes Neighboring gene alpha-1,3-mannosyl-glycoprotein 2-beta-N-acetylglucosaminyltransferase-like Neighboring gene syntrophin alpha 1 Neighboring gene N-terminal EF-hand calcium binding protein 3 Neighboring gene actin like 10 Neighboring gene E2F transcription factor 1

Genomic regions, transcripts, and products

Go to the top of the page Help
Genomic Sequence:
NW_006921607 Unplaced Scaffold Reference OryAfe1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables transcription corepressor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in DNA-templated transcription IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in negative regulation of DNA-templated transcription IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
protein CBFA2T2
Names
CBFA2/RUNX1 translocation partner 2

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Orycteropus afer afer Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference OryAfe1.0 Primary Assembly

Genomic

  1. NW_006921607.1 Reference OryAfe1.0 Primary Assembly

    Range
    9027704..9078939
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_007934566.2 → XP_007932757.1  protein CBFA2T2

    UniProtKB/TrEMBL
    A0A8B6ZCH4
    Conserved Domains (4) summary
    pfam01753
    Location:478 → 514
    zf-MYND; MYND finger
    pfam03763
    Location:410 → 461
    Remorin_C; Remorin, C-terminal region
    pfam07531
    Location:86 → 172
    TAFH; NHR1 homology to TAF
    pfam08788
    Location:302 → 368
    NHR2; NHR2 domain like
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.