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fbxw4 F-box and WD repeat domain containing 4 [ Callorhinchus milii (elephant shark) ]

Gene ID: 103190564, updated on 11-Mar-2024

Summary

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Gene symbol
fbxw4
Gene description
F-box and WD repeat domain containing 4
See related
Ensembl:ENSCMIG00000014345
Gene type
protein coding
RefSeq status
MODEL
Organism
Callorhinchus milii
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Chondrichthyes; Holocephali; Chimaeriformes; Callorhinchidae; Callorhinchus
Orthologs
human zebrafish all
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Genomic context

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Location:
chromosome: Un
Exon count:
9
Annotation release Status Assembly Chr Location
101 current IMCB_Cmil_1.0 (GCF_018977255.1) Unplaced Scaffold NW_024704748.1 (27488924..27533046, complement)
100 previous assembly Callorhinchus_milii-6.1.3 (GCF_000165045.1) Unplaced Scaffold NW_006890506.1 (9903..43119)

NW_024704748.1Genomic Context describing neighboring genes Neighboring gene protein DPCD Neighboring gene protein DPCD-like Neighboring gene fibroblast growth factor 8a Neighboring gene solute carrier family 2, facilitated glucose transporter member 5 Neighboring gene transfer RNA valine (anticodon GAC)

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Elephant shark genome provides unique insights into gnathostome evolution. Venkatesh B, et al. Nature, 2014 Jan 9. PMID 24402279, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in SCF-dependent proteasomal ubiquitin-dependent protein catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of SCF ubiquitin ligase complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
F-box/WD repeat-containing protein 4

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Callorhinchus milii Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference IMCB_Cmil_1.0 Primary Assembly

Genomic

  1. NW_024704748.1 Reference IMCB_Cmil_1.0 Primary Assembly

    Range
    27488924..27533046 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_042337034.1 → XP_042192968.1  F-box/WD repeat-containing protein 4

    UniProtKB/TrEMBL
    A0A4W3IT16, V9L020
    Conserved Domains (3) summary
    sd00039
    Location:141 → 173
    7WD40; WD40 repeat [structural motif]
    pfam12937
    Location:14 → 45
    F-box-like
    cl29593
    Location:128 → 367
    WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
Nucleotide Protein
Heading Accession and Version

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