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LOC103190321 pyruvate carboxylase, mitochondrial [ Callorhinchus milii (elephant shark) ]

Gene ID: 103190321, updated on 7-Dec-2023

Summary

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Gene symbol
LOC103190321
Gene description
pyruvate carboxylase, mitochondrial
See related
Ensembl:ENSCMIG00000003122
Gene type
protein coding
RefSeq status
MODEL
Organism
Callorhinchus milii
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Chondrichthyes; Holocephali; Chimaeriformes; Callorhinchidae; Callorhinchus
Also known as
pc
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Genomic context

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Location:
chromosome: Un
Exon count:
22
Annotation release Status Assembly Chr Location
101 current IMCB_Cmil_1.0 (GCF_018977255.1) Unplaced Scaffold NW_024704778.1 (332176..535622, complement)
100 previous assembly Callorhinchus_milii-6.1.3 (GCF_000165045.1) Unplaced Scaffold NW_006890434.1 (26062..159049)

NW_024704778.1Genomic Context describing neighboring genes Neighboring gene putative surface protein SACOL0050 Neighboring gene autophagy-related protein 2 homolog A-like Neighboring gene leucine-rich repeat and fibronectin type-III domain-containing protein 4 Neighboring gene uncharacterized LOC121851421 Neighboring gene gonadal somatic cell derived factor

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Elephant shark genome provides unique insights into gnathostome evolution. Venkatesh B, et al. Nature, 2014 Jan 9. PMID 24402279, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables metal ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables pyruvate carboxylase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in gluconeogenesis IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in mRNA transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in pyruvate metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
pyruvate carboxylase, mitochondrial
Names
nuclear RNA export factor 1
pyruvate carboxylase, mitochondrial-like protein

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Callorhinchus milii Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference IMCB_Cmil_1.0 Primary Assembly

Genomic

  1. NW_024704778.1 Reference IMCB_Cmil_1.0 Primary Assembly

    Range
    332176..535622 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_042345251.1 → XP_042201185.1  pyruvate carboxylase, mitochondrial

    Conserved Domains (3) summary
    smart00804
    Location:855 → 917
    TAP_C; C-terminal domain of vertebrate Tap protein
    cl39082
    Location:35 → 741
    PycA; Pyruvate carboxylase [Energy production and conversion]
    cl09109
    Location:754 → 837
    NTF2_like; Nuclear transport factor 2 (NTF2-like) superfamily. This family includes members of the NTF2 family, Delta-5-3-ketosteroid isomerases, Scytalone Dehydratases, and the beta subunit of Ring hydroxylating dioxygenases. This family is a classic example of ...
Nucleotide Protein
Heading Accession and Version

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