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csad cysteine sulfinic acid decarboxylase [ Callorhinchus milii (elephant shark) ]

Gene ID: 103189933, updated on 11-Mar-2024

Summary

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Gene symbol
csad
Gene description
cysteine sulfinic acid decarboxylase
See related
Ensembl:ENSCMIG00000012088
Gene type
protein coding
RefSeq status
MODEL
Organism
Callorhinchus milii
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Chondrichthyes; Holocephali; Chimaeriformes; Callorhinchidae; Callorhinchus
Orthologs
human zebrafish all
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Genomic context

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Location:
chromosome: Un
Exon count:
14
Annotation release Status Assembly Chr Location
101 current IMCB_Cmil_1.0 (GCF_018977255.1) Unplaced Scaffold NW_024704768.1 (5060295..5065205, complement)
100 previous assembly Callorhinchus_milii-6.1.3 (GCF_000165045.1) Unplaced Scaffold NW_006890370.1 (31667..37023, complement)

NW_024704768.1Genomic Context describing neighboring genes Neighboring gene insulin-like growth factor-binding protein 5 Neighboring gene sterol O-acyltransferase 2 Neighboring gene zinc finger protein 148-like Neighboring gene gametocyte-specific factor 1 Neighboring gene gametocyte-specific factor 1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Elephant shark genome provides unique insights into gnathostome evolution. Venkatesh B, et al. Nature, 2014 Jan 9. PMID 24402279, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables pyridoxal phosphate binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables sulfinoalanine decarboxylase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in carboxylic acid metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
cysteine sulfinic acid decarboxylase

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Callorhinchus milii Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference IMCB_Cmil_1.0 Primary Assembly

Genomic

  1. NW_024704768.1 Reference IMCB_Cmil_1.0 Primary Assembly

    Range
    5060295..5065205 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_007910500.2 → XP_007908691.2  cysteine sulfinic acid decarboxylase isoform X2

    UniProtKB/TrEMBL
    V9KP17
    Conserved Domains (1) summary
    cd06450
    Location:82 → 482
    DOPA_deC_like; DOPA decarboxylase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to DOPA/tyrosine decarboxylase (DDC), histidine decarboxylase (HDC), and ...

  2. XM_007910499.2 → XP_007908690.2  cysteine sulfinic acid decarboxylase isoform X1

    UniProtKB/TrEMBL
    V9KP17
    Conserved Domains (1) summary
    cd06450
    Location:82 → 516
    DOPA_deC_like; DOPA decarboxylase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to DOPA/tyrosine decarboxylase (DDC), histidine decarboxylase (HDC), and ...

  3. XM_042344340.1 → XP_042200274.1  cysteine sulfinic acid decarboxylase isoform X3

    Conserved Domains (1) summary
    cl18945
    Location:1 → 397
    AAT_I; Aspartate aminotransferase (AAT) superfamily (fold type I) of pyridoxal phosphate (PLP)-dependent enzymes. PLP combines with an alpha-amino acid to form a compound called a Schiff base or aldimine intermediate, which depending on the reaction, is the ...
Nucleotide Protein
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