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dlx6a distal-less homeobox 6a [ Callorhinchus milii (elephant shark) ]

Gene ID: 103185980, updated on 11-Mar-2024

Summary

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Gene symbol
dlx6a
Gene description
distal-less homeobox 6a
See related
Ensembl:ENSCMIG00000007429
Gene type
protein coding
RefSeq status
MODEL
Organism
Callorhinchus milii
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Chondrichthyes; Holocephali; Chimaeriformes; Callorhinchidae; Callorhinchus
Also known as
dlx6
Orthologs
human zebrafish all
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Genomic context

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Location:
chromosome: Un
Exon count:
3
Annotation release Status Assembly Chr Location
101 current IMCB_Cmil_1.0 (GCF_018977255.1) Unplaced Scaffold NW_024704743.1 (59937931..59943349)
100 previous assembly Callorhinchus_milii-6.1.3 (GCF_000165045.1) Unplaced Scaffold NW_006890182.1 (35448..41065, complement)

NW_024704743.1Genomic Context describing neighboring genes Neighboring gene calcium-binding mitochondrial carrier protein Aralar2 Neighboring gene SEM1 26S proteasome subunit Neighboring gene distal-less homeobox 5a Neighboring gene pyruvate dehydrogenase kinase, isozyme 4

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Elephant shark genome provides unique insights into gnathostome evolution. Venkatesh B, et al. Nature, 2014 Jan 9. PMID 24402279, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cell differentiation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in embryo development IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
homeobox protein Dlx6a
Names
distal-less homeobox 6

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Callorhinchus milii Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference IMCB_Cmil_1.0 Primary Assembly

Genomic

  1. NW_024704743.1 Reference IMCB_Cmil_1.0 Primary Assembly

    Range
    59937931..59943349
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_007904752.2 → XP_007902943.1  homeobox protein Dlx6a

    See identical proteins and their annotated locations for XP_007902943.1

    UniProtKB/TrEMBL
    A0A4W3HIL6, V9KSD5
    Related
    ENSCMIP00000015150.1
    Conserved Domains (1) summary
    pfam00046
    Location:122 → 175
    Homeobox; Homeobox domain
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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