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tmem39b transmembrane protein 39B [ Callorhinchus milii (elephant shark) ]

Gene ID: 103185659, updated on 11-Mar-2024

Summary

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Gene symbol
tmem39b
Gene description
transmembrane protein 39B
See related
Ensembl:ENSCMIG00000014380
Gene type
protein coding
RefSeq status
MODEL
Organism
Callorhinchus milii
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Chondrichthyes; Holocephali; Chimaeriformes; Callorhinchidae; Callorhinchus
Orthologs
human zebrafish all
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Genomic context

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See tmem39b in Genome Data Viewer
Location:
chromosome: Un
Exon count:
10
Annotation release Status Assembly Chr Location
101 current IMCB_Cmil_1.0 (GCF_018977255.1) Unplaced Scaffold NW_024704751.1 (11372349..11379883, complement)
100 previous assembly Callorhinchus_milii-6.1.3 (GCF_000165045.1) Unplaced Scaffold NW_006890174.1 (1487607..1492464)

NW_024704751.1Genomic Context describing neighboring genes Neighboring gene alpha-taxilin Neighboring gene importin subunit alpha-7 Neighboring gene ring finger protein 19B Neighboring gene adenylate kinase 2

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Elephant shark genome provides unique insights into gnathostome evolution. Venkatesh B, et al. Nature, 2014 Jan 9. PMID 24402279, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
transmembrane protein 39B

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Callorhinchus milii Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference IMCB_Cmil_1.0 Primary Assembly

Genomic

  1. NW_024704751.1 Reference IMCB_Cmil_1.0 Primary Assembly

    Range
    11372349..11379883 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_042338743.1 → XP_042194677.1  transmembrane protein 39B isoform X2

    UniProtKB/TrEMBL
    A0A4W3J6E6, A0A4W3JNV2

  2. XM_042338742.1 → XP_042194676.1  transmembrane protein 39B isoform X1

    UniProtKB/TrEMBL
    A0A4W3J6E6, V9KS93
    Conserved Domains (1) summary
    pfam10271
    Location:47 → 478
    Tmp39; Putative transmembrane protein
Nucleotide Protein
Heading Accession and Version

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