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LOC103181313 protein Jade-1 [ Callorhinchus milii (elephant shark) ]

Gene ID: 103181313, updated on 7-Dec-2023

Summary

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Gene symbol
LOC103181313
Gene description
protein Jade-1
See related
Ensembl:ENSCMIG00000000525
Gene type
protein coding
RefSeq status
MODEL
Organism
Callorhinchus milii
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Chondrichthyes; Holocephali; Chimaeriformes; Callorhinchidae; Callorhinchus
Also known as
jade1
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Genomic context

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Location:
chromosome: Un
Exon count:
10
Annotation release Status Assembly Chr Location
101 current IMCB_Cmil_1.0 (GCF_018977255.1) Unplaced Scaffold NW_024704742.1 (27015161..27060517)
100 previous assembly Callorhinchus_milii-6.1.3 (GCF_000165045.1) Unplaced Scaffold NW_006890110.1 (3935402..4012582, complement)

NW_024704742.1Genomic Context describing neighboring genes Neighboring gene TBC1 domain family, member 14 Neighboring gene uncharacterized LOC103181316 Neighboring gene uncharacterized LOC103181315 Neighboring gene sodium channel and clathrin linker 1 Neighboring gene chromosome unknown C4orf33 homolog Neighboring gene protein diaphanous homolog 2-like Neighboring gene transfer RNA valine (anticodon UAC)

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of histone acetyltransferase complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
LOW QUALITY PROTEIN: protein Jade-1
Names
jade family PHD finger 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Callorhinchus milii Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference IMCB_Cmil_1.0 Primary Assembly

Genomic

  1. NW_024704742.1 Reference IMCB_Cmil_1.0 Primary Assembly

    Range
    27015161..27060517
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_042338933.1 → XP_042194867.1  LOW QUALITY PROTEIN: protein Jade-1

    UniProtKB/TrEMBL
    A0A4W3GBX4
    Conserved Domains (2) summary
    COG5141
    Location:142 → 534
    COG5141; PHD zinc finger-containing protein [General function prediction only]
    cd15671
    Location:259 → 369
    ePHD_JADE; Extended PHD finger found in protein Jade-1, Jade-2, Jade-3 and similar proteins
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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