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LOC103180897 protein ZGRF1 [ Callorhinchus milii (elephant shark) ]

Gene ID: 103180897, updated on 7-Dec-2023

Summary

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Gene symbol
LOC103180897
Gene description
protein ZGRF1
Gene type
protein coding
RefSeq status
MODEL
Organism
Callorhinchus milii
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Chondrichthyes; Holocephali; Chimaeriformes; Callorhinchidae; Callorhinchus
Also known as
zgrf1
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Genomic context

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Location:
chromosome: Un
Exon count:
30
Annotation release Status Assembly Chr Location
101 current IMCB_Cmil_1.0 (GCF_018977255.1) Unplaced Scaffold NW_024704742.1 (33679242..33725506)
100 previous assembly Callorhinchus_milii-6.1.3 (GCF_000165045.1) Unplaced Scaffold NW_006890103.1 (4046080..4092450, complement)

NW_024704742.1Genomic Context describing neighboring genes Neighboring gene GTP-binding nuclear protein Ran-like Neighboring gene transfer RNA threonine (anticodon GGU) Neighboring gene La ribonucleoprotein 7, transcriptional regulator Neighboring gene transfer RNA proline (anticodon UGG) Neighboring gene neurogenin-2-like Neighboring gene alpha-kinase 1 Neighboring gene TRAF interacting protein with forkhead associated domain

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Sequencing and analysis of full-length cDNAs, 5'-ESTs and 3'-ESTs from a cartilaginous fish, the elephant shark (Callorhinchus milii). Tan YY, et al. PLoS One, 2012. PMID 23056606, Free PMC Article
  2. Elephant shark genome provides unique insights into gnathostome evolution. Venkatesh B, et al. Nature, 2014 Jan 9. PMID 24402279, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables helicase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables zinc ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in double-strand break repair IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in site of double-strand break IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
protein ZGRF1
Names
prematurely terminated mRNA decay factor-like protein
zinc finger GRF-type containing 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Callorhinchus milii Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference IMCB_Cmil_1.0 Primary Assembly

Genomic

  1. NW_024704742.1 Reference IMCB_Cmil_1.0 Primary Assembly

    Range
    33679242..33725506
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_007897009.2 → XP_007895200.2  protein ZGRF1

    Conserved Domains (2) summary
    TIGR00376
    Location:1414 → 1821
    TIGR00376; DNA helicase, putative
    cd18808
    Location:1642 → 1821
    SF1_C_Upf1; C-terminal helicase domain of Upf1-like family helicases
Nucleotide Protein
Heading Accession and Version

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