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ptgr2 prostaglandin reductase 2 [ Callorhinchus milii (elephant shark) ]

Gene ID: 103178467, updated on 11-Mar-2024

Summary

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Gene symbol
ptgr2
Gene description
prostaglandin reductase 2
See related
Ensembl:ENSCMIG00000018253
Gene type
protein coding
RefSeq status
MODEL
Organism
Callorhinchus milii
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Chondrichthyes; Holocephali; Chimaeriformes; Callorhinchidae; Callorhinchus
Orthologs
human zebrafish all
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Genomic context

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Location:
chromosome: Un
Exon count:
10
Annotation release Status Assembly Chr Location
101 current IMCB_Cmil_1.0 (GCF_018977255.1) Unplaced Scaffold NW_024704750.1 (17909876..17924426, complement)
100 previous assembly Callorhinchus_milii-6.1.3 (GCF_000165045.1) Unplaced Scaffold NW_006890081.1 (1188745..1203028)

NW_024704750.1Genomic Context describing neighboring genes Neighboring gene ubiquitin protein ligase E3 component n-recognin 1 Neighboring gene transmembrane protein 62 Neighboring gene mitotic deacetylase associated SANT domain protein b Neighboring gene dynein, axonemal, light chain 1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Elephant shark genome provides unique insights into gnathostome evolution. Venkatesh B, et al. Nature, 2014 Jan 9. PMID 24402279, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables 15-oxoprostaglandin 13-oxidase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in prostaglandin metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
prostaglandin reductase 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Callorhinchus milii Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference IMCB_Cmil_1.0 Primary Assembly

Genomic

  1. NW_024704750.1 Reference IMCB_Cmil_1.0 Primary Assembly

    Range
    17909876..17924426 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_007893226.2 → XP_007891417.1  prostaglandin reductase 2

    See identical proteins and their annotated locations for XP_007891417.1

    UniProtKB/TrEMBL
    A0A4W3KDT2, V9KYT1
    Related
    ENSCMIP00000044044.1
    Conserved Domains (2) summary
    cd08293
    Location:4 → 346
    PTGR2; Prostaglandin reductase
    COG2130
    Location:5 → 348
    CurA; NADPH-dependent curcumin reductase CurA [Secondary metabolites biosynthesis, transport and catabolism, General function prediction only]
Nucleotide Protein
Heading Accession and Version

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