U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

abca5 ATP-binding cassette, sub-family A (ABC1), member 5 [ Callorhinchus milii (elephant shark) ]

Gene ID: 103175501, updated on 11-Mar-2024

Summary

Go to the top of the page Help
Gene symbol
abca5
Gene description
ATP-binding cassette, sub-family A (ABC1), member 5
See related
Ensembl:ENSCMIG00000018894
Gene type
protein coding
RefSeq status
MODEL
Organism
Callorhinchus milii
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Chondrichthyes; Holocephali; Chimaeriformes; Callorhinchidae; Callorhinchus
Orthologs
human zebrafish all
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See abca5 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
38
Annotation release Status Assembly Chr Location
101 current IMCB_Cmil_1.0 (GCF_018977255.1) Unplaced Scaffold NW_024704761.1 (5969738..5998260, complement)
100 previous assembly Callorhinchus_milii-6.1.3 (GCF_000165045.1) Unplaced Scaffold NW_006890063.1 (5806013..5834276)

NW_024704761.1Genomic Context describing neighboring genes Neighboring gene platelet-derived growth factor subunit A Neighboring gene FAM20A golgi associated secretory pathway pseudokinase Neighboring gene kinesin family member 19 Neighboring gene dynein, axonemal, intermediate chain 2b

Genomic regions, transcripts, and products

Go to the top of the page Help

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. Elephant shark genome provides unique insights into gnathostome evolution. Venkatesh B, et al. Nature, 2014 Jan 9. PMID 24402279, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ABC-type transporter activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables ATP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables ATP hydrolysis activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables lipid transporter activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in lipid transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in transmembrane transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in intracellular membrane-bounded organelle IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
ATP-binding cassette sub-family A member 5
Names
ATP binding cassette subfamily A member 5

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Callorhinchus milii Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference IMCB_Cmil_1.0 Primary Assembly

Genomic

  1. NW_024704761.1 Reference IMCB_Cmil_1.0 Primary Assembly

    Range
    5969738..5998260 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_042342355.1 → XP_042198289.1  ATP-binding cassette sub-family A member 5

    UniProtKB/TrEMBL
    A0A4W3K4G8
    Conserved Domains (1) summary
    TIGR01257
    Location:91 → 1646
    rim_protein; retinal-specific rim ABC transporter
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.