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ndufa6 NADH:ubiquinone oxidoreductase subunit A6 [ Callorhinchus milii (elephant shark) ]

Gene ID: 103173699, updated on 11-Mar-2024

Summary

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Gene symbol
ndufa6
Gene description
NADH:ubiquinone oxidoreductase subunit A6
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Callorhinchus milii
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Chondrichthyes; Holocephali; Chimaeriformes; Callorhinchidae; Callorhinchus
Annotation information
Annotation category: partial on reference assembly
Orthologs
human zebrafish all
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Genomic context

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Location:
chromosome: Un
Exon count:
3
Annotation release Status Assembly Chr Location
101 current IMCB_Cmil_1.0 (GCF_018977255.1) Unplaced Scaffold NW_024704772.1 (3818737..3823229, complement)
101 current IMCB_Cmil_1.0 (GCF_018977255.1) Unplaced Scaffold NW_024706407.1 (508..729, complement)
100 previous assembly Callorhinchus_milii-6.1.3 (GCF_000165045.1) Unplaced Scaffold NW_006896353.1 (2402..2619)

NW_024706407.1Genomic Context describing neighboring genes Neighboring gene 18S ribosomal RNA Neighboring gene NHP2 ribonucleoprotein homolog (yeast) Neighboring gene uncharacterized LOC121852887

NW_024704772.1Genomic Context describing neighboring genes Neighboring gene myoglobin Neighboring gene single-pass membrane protein with aspartate-rich tail 1b Neighboring gene DEAD (Asp-Glu-Ala-Asp) box polypeptide 59 Neighboring gene transfer RNA arginine (anticodon CCU)

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Sequencing and analysis of full-length cDNAs, 5'-ESTs and 3'-ESTs from a cartilaginous fish, the elephant shark (Callorhinchus milii). Tan YY, et al. PLoS One, 2012. PMID 23056606, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in response to oxidative stress IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of mitochondrial respiratory chain complex I IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 6

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001292343.1 → NP_001279272.1  NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 6

    See identical proteins and their annotated locations for NP_001279272.1

    Status: PROVISIONAL

    Source sequence(s)
    JX210177
    UniProtKB/TrEMBL
    K4FSB1
    Conserved Domains (1) summary
    pfam05347
    Location:29 → 91
    Complex1_LYR; Complex 1 protein (LYR family)

RefSeqs of Annotated Genomes: Callorhinchus milii Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference IMCB_Cmil_1.0 Primary Assembly

Genomic

  1. NW_024704772.1 Reference IMCB_Cmil_1.0 Primary Assembly

    Range
    3818737..3823229 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Reference IMCB_Cmil_1.0 Primary Assembly

Genomic

  1. NW_024706407.1 Reference IMCB_Cmil_1.0 Primary Assembly

    Range
    508..729 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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